Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.19■□□□□ 0.5
RTFDC1Q9BY42 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
RTFDC1Q9BY42 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
RTFDC1Q9BY42 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC18.19■□□□□ 0.5
RTFDC1Q9BY42 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC18.19■□□□□ 0.5
RTFDC1Q9BY42 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RTFDC1Q9BY42 AC114501.1-201ENST00000445949 172 ntBASIC18.19■□□□□ 0.5
RTFDC1Q9BY42 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC18.19■□□□□ 0.5
RTFDC1Q9BY42 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTFDC1Q9BY42 AC130709.1-201ENST00000484779 1212 ntBASIC18.19■□□□□ 0.5
RTFDC1Q9BY42 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.19■□□□□ 0.5
RTFDC1Q9BY42 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC18.19■□□□□ 0.5
RTFDC1Q9BY42 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC18.19■□□□□ 0.5
RTFDC1Q9BY42 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC18.19■□□□□ 0.5
RTFDC1Q9BY42 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
RTFDC1Q9BY42 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC18.19■□□□□ 0.5
RTFDC1Q9BY42 WT1-AS_6.1-201ENST00000614919 121 ntBASIC18.19■□□□□ 0.5
RTFDC1Q9BY42 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTFDC1Q9BY42 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTFDC1Q9BY42 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTFDC1Q9BY42 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTFDC1Q9BY42 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTFDC1Q9BY42 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC18.19■□□□□ 0.5
RTFDC1Q9BY42 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
RTFDC1Q9BY42 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
RTFDC1Q9BY42 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTFDC1Q9BY42 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTFDC1Q9BY42 AC020658.6-201ENST00000623564 1870 ntBASIC18.18■□□□□ 0.5
RTFDC1Q9BY42 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTFDC1Q9BY42 BID-213ENST00000615414 2236 ntTSL 5 BASIC18.18■□□□□ 0.5
RTFDC1Q9BY42 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTFDC1Q9BY42 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18.18■□□□□ 0.5
RTFDC1Q9BY42 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTFDC1Q9BY42 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
RTFDC1Q9BY42 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTFDC1Q9BY42 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC18.18■□□□□ 0.5
RTFDC1Q9BY42 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC18.18■□□□□ 0.5
RTFDC1Q9BY42 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTFDC1Q9BY42 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTFDC1Q9BY42 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC18.18■□□□□ 0.5
RTFDC1Q9BY42 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTFDC1Q9BY42 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC18.18■□□□□ 0.5
RTFDC1Q9BY42 CICP12-201ENST00000455801 843 ntBASIC18.18■□□□□ 0.5
RTFDC1Q9BY42 PFN2-206ENST00000461930 606 ntTSL 4 BASIC18.18■□□□□ 0.5
RTFDC1Q9BY42 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC18.18■□□□□ 0.5
RTFDC1Q9BY42 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTFDC1Q9BY42 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
RTFDC1Q9BY42 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC18.18■□□□□ 0.5
RTFDC1Q9BY42 HPN-206ENST00000597419 1212 ntTSL 5 BASIC18.18■□□□□ 0.5
RTFDC1Q9BY42 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTFDC1Q9BY42 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
RTFDC1Q9BY42 HLA-C-210ENST00000640219 976 ntBASIC18.18■□□□□ 0.5
RTFDC1Q9BY42 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTFDC1Q9BY42 AL359258.3-201ENST00000622910 2331 ntBASIC18.18■□□□□ 0.5
RTFDC1Q9BY42 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTFDC1Q9BY42 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTFDC1Q9BY42 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
RTFDC1Q9BY42 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.18■□□□□ 0.5
RTFDC1Q9BY42 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
RTFDC1Q9BY42 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC18.18■□□□□ 0.5
RTFDC1Q9BY42 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTFDC1Q9BY42 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RTFDC1Q9BY42 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTFDC1Q9BY42 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RTFDC1Q9BY42 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC18.17■□□□□ 0.5
RTFDC1Q9BY42 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTFDC1Q9BY42 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RTFDC1Q9BY42 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTFDC1Q9BY42 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC18.17■□□□□ 0.5
RTFDC1Q9BY42 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
RTFDC1Q9BY42 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTFDC1Q9BY42 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RTFDC1Q9BY42 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.17■□□□□ 0.5
RTFDC1Q9BY42 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
RTFDC1Q9BY42 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RTFDC1Q9BY42 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTFDC1Q9BY42 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.17■□□□□ 0.5
RTFDC1Q9BY42 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC18.17■□□□□ 0.5
RTFDC1Q9BY42 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RTFDC1Q9BY42 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RTFDC1Q9BY42 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
RTFDC1Q9BY42 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RTFDC1Q9BY42 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC18.17■□□□□ 0.5
RTFDC1Q9BY42 AL645933.1-201ENST00000440087 609 ntBASIC18.17■□□□□ 0.5
RTFDC1Q9BY42 RN7SL8P-201ENST00000461771 266 ntBASIC18.17■□□□□ 0.5
RTFDC1Q9BY42 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC18.17■□□□□ 0.5
RTFDC1Q9BY42 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC18.17■□□□□ 0.5
RTFDC1Q9BY42 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC18.17■□□□□ 0.5
RTFDC1Q9BY42 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC18.17■□□□□ 0.5
RTFDC1Q9BY42 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RTFDC1Q9BY42 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC18.17■□□□□ 0.5
RTFDC1Q9BY42 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC18.17■□□□□ 0.5
RTFDC1Q9BY42 MIR3677-201ENST00000578964 60 ntBASIC18.17■□□□□ 0.5
RTFDC1Q9BY42 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC18.17■□□□□ 0.5
RTFDC1Q9BY42 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC18.17■□□□□ 0.5
RTFDC1Q9BY42 AC242376.2-201ENST00000619355 883 ntBASIC18.17■□□□□ 0.5
RTFDC1Q9BY42 AC007718.1-201ENST00000621078 280 ntBASIC18.17■□□□□ 0.5
RTFDC1Q9BY42 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RTFDC1Q9BY42 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC18.17■□□□□ 0.5
RTFDC1Q9BY42 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms