Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.4□□□□□ -0.1
YIPF4Q9BSR8 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
YIPF4Q9BSR8 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
YIPF4Q9BSR8 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
YIPF4Q9BSR8 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
YIPF4Q9BSR8 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
YIPF4Q9BSR8 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.4□□□□□ -0.1
YIPF4Q9BSR8 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
YIPF4Q9BSR8 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
YIPF4Q9BSR8 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.39□□□□□ -0.11
YIPF4Q9BSR8 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.39□□□□□ -0.11
YIPF4Q9BSR8 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
YIPF4Q9BSR8 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
YIPF4Q9BSR8 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
YIPF4Q9BSR8 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
YIPF4Q9BSR8 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
YIPF4Q9BSR8 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
YIPF4Q9BSR8 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
YIPF4Q9BSR8 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.39□□□□□ -0.11
YIPF4Q9BSR8 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
YIPF4Q9BSR8 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC14.39□□□□□ -0.11
YIPF4Q9BSR8 AC013726.1-201ENST00000563747 2285 ntBASIC14.39□□□□□ -0.11
YIPF4Q9BSR8 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
YIPF4Q9BSR8 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
YIPF4Q9BSR8 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
YIPF4Q9BSR8 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
YIPF4Q9BSR8 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.39□□□□□ -0.11
YIPF4Q9BSR8 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.39□□□□□ -0.11
YIPF4Q9BSR8 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
YIPF4Q9BSR8 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
YIPF4Q9BSR8 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
YIPF4Q9BSR8 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.39□□□□□ -0.11
YIPF4Q9BSR8 GNAQP1-201ENST00000444815 1067 ntBASIC14.39□□□□□ -0.11
YIPF4Q9BSR8 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
YIPF4Q9BSR8 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.39□□□□□ -0.11
YIPF4Q9BSR8 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.39□□□□□ -0.11
YIPF4Q9BSR8 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.39□□□□□ -0.11
YIPF4Q9BSR8 RNA5-8SN1-201ENST00000610460 153 ntBASIC14.39□□□□□ -0.11
YIPF4Q9BSR8 RNA5-8SN5-202ENST00000612463 153 ntBASIC14.39□□□□□ -0.11
YIPF4Q9BSR8 RNA5-8SN4-201ENST00000613359 153 ntBASIC14.39□□□□□ -0.11
YIPF4Q9BSR8 RNA5-8SN5-201ENST00000619471 153 ntBASIC14.39□□□□□ -0.11
YIPF4Q9BSR8 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
YIPF4Q9BSR8 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
YIPF4Q9BSR8 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
YIPF4Q9BSR8 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.39□□□□□ -0.11
YIPF4Q9BSR8 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.39□□□□□ -0.11
YIPF4Q9BSR8 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
YIPF4Q9BSR8 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
YIPF4Q9BSR8 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
YIPF4Q9BSR8 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.39□□□□□ -0.11
YIPF4Q9BSR8 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
YIPF4Q9BSR8 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
YIPF4Q9BSR8 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
YIPF4Q9BSR8 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
YIPF4Q9BSR8 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.39□□□□□ -0.11
YIPF4Q9BSR8 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
YIPF4Q9BSR8 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
YIPF4Q9BSR8 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
YIPF4Q9BSR8 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
YIPF4Q9BSR8 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.39□□□□□ -0.11
YIPF4Q9BSR8 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
YIPF4Q9BSR8 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
YIPF4Q9BSR8 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
YIPF4Q9BSR8 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.38□□□□□ -0.11
YIPF4Q9BSR8 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
YIPF4Q9BSR8 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
YIPF4Q9BSR8 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
YIPF4Q9BSR8 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.38□□□□□ -0.11
YIPF4Q9BSR8 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
YIPF4Q9BSR8 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
YIPF4Q9BSR8 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
YIPF4Q9BSR8 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.38□□□□□ -0.11
YIPF4Q9BSR8 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
YIPF4Q9BSR8 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
YIPF4Q9BSR8 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
YIPF4Q9BSR8 PIN1P1-201ENST00000412108 996 ntBASIC14.38□□□□□ -0.11
YIPF4Q9BSR8 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.38□□□□□ -0.11
YIPF4Q9BSR8 CRB3P1-201ENST00000449338 276 ntBASIC14.38□□□□□ -0.11
YIPF4Q9BSR8 GAPDHP21-201ENST00000450301 1010 ntBASIC14.38□□□□□ -0.11
YIPF4Q9BSR8 TMPRSS11CP-201ENST00000453277 683 ntBASIC14.38□□□□□ -0.11
YIPF4Q9BSR8 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
YIPF4Q9BSR8 SERBP1P5-201ENST00000510079 1181 ntBASIC14.38□□□□□ -0.11
YIPF4Q9BSR8 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
YIPF4Q9BSR8 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.38□□□□□ -0.11
YIPF4Q9BSR8 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.38□□□□□ -0.11
YIPF4Q9BSR8 AC023310.3-201ENST00000557027 670 ntBASIC14.38□□□□□ -0.11
YIPF4Q9BSR8 AC100756.1-201ENST00000562736 682 ntBASIC14.38□□□□□ -0.11
YIPF4Q9BSR8 AC138749.3-201ENST00000567691 622 ntBASIC14.38□□□□□ -0.11
YIPF4Q9BSR8 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.38□□□□□ -0.11
YIPF4Q9BSR8 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
YIPF4Q9BSR8 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.38□□□□□ -0.11
YIPF4Q9BSR8 AC000095.1-201ENST00000603208 874 ntBASIC14.38□□□□□ -0.11
YIPF4Q9BSR8 AC116165.1-201ENST00000611806 668 ntBASIC14.38□□□□□ -0.11
YIPF4Q9BSR8 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.38□□□□□ -0.11
YIPF4Q9BSR8 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.38□□□□□ -0.11
YIPF4Q9BSR8 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
YIPF4Q9BSR8 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.38□□□□□ -0.11
YIPF4Q9BSR8 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
YIPF4Q9BSR8 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
YIPF4Q9BSR8 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms