Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 AL137784.3-201ENST00000623858 2288 ntBASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PCGF1Q9BSM1 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC12.85□□□□□ -0.35
PCGF1Q9BSM1 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC12.85□□□□□ -0.35
PCGF1Q9BSM1 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC12.85□□□□□ -0.35
PCGF1Q9BSM1 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PCGF1Q9BSM1 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC12.85□□□□□ -0.35
PCGF1Q9BSM1 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PCGF1Q9BSM1 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PCGF1Q9BSM1 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC12.85□□□□□ -0.35
PCGF1Q9BSM1 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PCGF1Q9BSM1 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
PCGF1Q9BSM1 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
PCGF1Q9BSM1 AC087481.3-201ENST00000602886 1894 ntBASIC12.85□□□□□ -0.35
PCGF1Q9BSM1 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
PCGF1Q9BSM1 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
PCGF1Q9BSM1 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PCGF1Q9BSM1 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC12.85□□□□□ -0.35
PCGF1Q9BSM1 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
PCGF1Q9BSM1 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
PCGF1Q9BSM1 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PCGF1Q9BSM1 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
PCGF1Q9BSM1 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
PCGF1Q9BSM1 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC12.85□□□□□ -0.35
PCGF1Q9BSM1 AC244107.1-201ENST00000442033 332 ntBASIC12.85□□□□□ -0.35
PCGF1Q9BSM1 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC12.85□□□□□ -0.35
PCGF1Q9BSM1 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC12.85□□□□□ -0.35
PCGF1Q9BSM1 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC12.85□□□□□ -0.35
PCGF1Q9BSM1 RN7SL837P-201ENST00000463010 287 ntBASIC12.85□□□□□ -0.35
PCGF1Q9BSM1 KRT18P43-201ENST00000469825 1281 ntBASIC12.85□□□□□ -0.35
PCGF1Q9BSM1 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
PCGF1Q9BSM1 PUDP-206ENST00000540122 825 ntTSL 2 BASIC12.85□□□□□ -0.35
PCGF1Q9BSM1 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC12.85□□□□□ -0.35
PCGF1Q9BSM1 CMC2-214ENST00000565925 640 ntTSL 5 BASIC12.85□□□□□ -0.35
PCGF1Q9BSM1 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC12.85□□□□□ -0.35
PCGF1Q9BSM1 AC133539.2-201ENST00000604757 467 ntBASIC12.85□□□□□ -0.35
PCGF1Q9BSM1 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.85□□□□□ -0.35
PCGF1Q9BSM1 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PCGF1Q9BSM1 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
PCGF1Q9BSM1 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
PCGF1Q9BSM1 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PCGF1Q9BSM1 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PCGF1Q9BSM1 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PCGF1Q9BSM1 TKT-202ENST00000423516 2075 ntTSL 2 BASIC12.85□□□□□ -0.35
PCGF1Q9BSM1 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
PCGF1Q9BSM1 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC12.85□□□□□ -0.35
PCGF1Q9BSM1 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC12.85□□□□□ -0.35
PCGF1Q9BSM1 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC12.85□□□□□ -0.35
PCGF1Q9BSM1 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC12.85□□□□□ -0.35
PCGF1Q9BSM1 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
PCGF1Q9BSM1 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
PCGF1Q9BSM1 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PCGF1Q9BSM1 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
PCGF1Q9BSM1 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
PCGF1Q9BSM1 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC12.85□□□□□ -0.35
PCGF1Q9BSM1 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 KCP-203ENST00000610776 5108 ntTSL 5 BASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 AL121723.1-201ENST00000445194 1519 ntBASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 NME2-201ENST00000393183 568 ntTSL 2 BASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 RPL13AP25-201ENST00000484130 612 ntBASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 AL049840.4-201ENST00000602422 811 ntBASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC12.84□□□□□ -0.35
PCGF1Q9BSM1 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms