Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
USB1Q9BQ65 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
USB1Q9BQ65 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
USB1Q9BQ65 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
USB1Q9BQ65 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.78□□□□□ -0.2
USB1Q9BQ65 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.78□□□□□ -0.2
USB1Q9BQ65 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
USB1Q9BQ65 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
USB1Q9BQ65 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
USB1Q9BQ65 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
USB1Q9BQ65 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
USB1Q9BQ65 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
USB1Q9BQ65 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
USB1Q9BQ65 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.78□□□□□ -0.2
USB1Q9BQ65 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
USB1Q9BQ65 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.77□□□□□ -0.2
USB1Q9BQ65 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
USB1Q9BQ65 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
USB1Q9BQ65 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
USB1Q9BQ65 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
USB1Q9BQ65 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
USB1Q9BQ65 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
USB1Q9BQ65 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
USB1Q9BQ65 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.2
USB1Q9BQ65 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.2
USB1Q9BQ65 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
USB1Q9BQ65 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
USB1Q9BQ65 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
USB1Q9BQ65 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
USB1Q9BQ65 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
USB1Q9BQ65 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
USB1Q9BQ65 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.77□□□□□ -0.21
USB1Q9BQ65 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
USB1Q9BQ65 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
USB1Q9BQ65 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
USB1Q9BQ65 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
USB1Q9BQ65 AL133267.1-201ENST00000398220 340 ntBASIC13.77□□□□□ -0.21
USB1Q9BQ65 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
USB1Q9BQ65 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC13.77□□□□□ -0.21
USB1Q9BQ65 MTND2P11-201ENST00000423638 648 ntBASIC13.77□□□□□ -0.21
USB1Q9BQ65 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC13.77□□□□□ -0.21
USB1Q9BQ65 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.77□□□□□ -0.21
USB1Q9BQ65 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC13.77□□□□□ -0.21
USB1Q9BQ65 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
USB1Q9BQ65 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.77□□□□□ -0.21
USB1Q9BQ65 LINC01821-202ENST00000438505 882 ntTSL 4 BASIC13.77□□□□□ -0.21
USB1Q9BQ65 AL162726.2-201ENST00000438986 1017 ntBASIC13.77□□□□□ -0.21
USB1Q9BQ65 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
USB1Q9BQ65 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
USB1Q9BQ65 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC13.77□□□□□ -0.21
USB1Q9BQ65 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.77□□□□□ -0.21
USB1Q9BQ65 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
USB1Q9BQ65 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
USB1Q9BQ65 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC13.77□□□□□ -0.21
USB1Q9BQ65 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
USB1Q9BQ65 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
USB1Q9BQ65 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
USB1Q9BQ65 ELL2P2-201ENST00000515135 694 ntBASIC13.77□□□□□ -0.21
USB1Q9BQ65 AC021546.1-201ENST00000518927 1031 ntTSL 3 BASIC13.77□□□□□ -0.21
USB1Q9BQ65 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.77□□□□□ -0.21
USB1Q9BQ65 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
USB1Q9BQ65 CFL1-212ENST00000531413 636 ntTSL 3 BASIC13.77□□□□□ -0.21
USB1Q9BQ65 KCTD14-202ENST00000533144 904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
USB1Q9BQ65 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
USB1Q9BQ65 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.77□□□□□ -0.21
USB1Q9BQ65 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.77□□□□□ -0.21
USB1Q9BQ65 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
USB1Q9BQ65 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.77□□□□□ -0.21
USB1Q9BQ65 AC090079.2-201ENST00000575289 768 ntBASIC13.77□□□□□ -0.21
USB1Q9BQ65 PIGL-212ENST00000581006 554 ntTSL 4 BASIC13.77□□□□□ -0.21
USB1Q9BQ65 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
USB1Q9BQ65 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.77□□□□□ -0.21
USB1Q9BQ65 AC015936.2-201ENST00000593177 259 ntBASIC13.77□□□□□ -0.21
USB1Q9BQ65 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC13.77□□□□□ -0.21
USB1Q9BQ65 AC123912.3-201ENST00000600907 1367 ntBASIC13.77□□□□□ -0.21
USB1Q9BQ65 AC133539.2-201ENST00000604757 467 ntBASIC13.77□□□□□ -0.21
USB1Q9BQ65 LINC01115-203ENST00000606068 577 ntBASIC13.77□□□□□ -0.21
USB1Q9BQ65 MIR8072-201ENST00000614241 80 ntBASIC13.77□□□□□ -0.21
USB1Q9BQ65 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
USB1Q9BQ65 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.77□□□□□ -0.21
USB1Q9BQ65 AL158212.4-201ENST00000624062 1286 ntBASIC13.77□□□□□ -0.21
USB1Q9BQ65 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.77□□□□□ -0.21
USB1Q9BQ65 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
USB1Q9BQ65 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.21
USB1Q9BQ65 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.77□□□□□ -0.21
USB1Q9BQ65 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
USB1Q9BQ65 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
USB1Q9BQ65 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.21
USB1Q9BQ65 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
USB1Q9BQ65 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
USB1Q9BQ65 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.77□□□□□ -0.21
USB1Q9BQ65 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
USB1Q9BQ65 HAL-202ENST00000538703 2637 ntTSL 2 BASIC13.77□□□□□ -0.21
USB1Q9BQ65 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
USB1Q9BQ65 SUPT20HL2-201ENST00000486479 2409 ntBASIC13.76□□□□□ -0.21
USB1Q9BQ65 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
USB1Q9BQ65 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
USB1Q9BQ65 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.76□□□□□ -0.21
USB1Q9BQ65 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
USB1Q9BQ65 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms