Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC11.61□□□□□ -0.55
VGLL1Q99990 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC11.61□□□□□ -0.55
VGLL1Q99990 AL627223.1-201ENST00000416693 442 ntBASIC11.61□□□□□ -0.55
VGLL1Q99990 AC074338.1-201ENST00000416825 156 ntBASIC11.61□□□□□ -0.55
VGLL1Q99990 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC11.61□□□□□ -0.55
VGLL1Q99990 USP40-206ENST00000443711 628 ntTSL 2 BASIC11.61□□□□□ -0.55
VGLL1Q99990 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC11.61□□□□□ -0.55
VGLL1Q99990 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VGLL1Q99990 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VGLL1Q99990 SLED1-202ENST00000512051 380 ntBASIC11.61□□□□□ -0.55
VGLL1Q99990 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC11.61□□□□□ -0.55
VGLL1Q99990 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC11.61□□□□□ -0.55
VGLL1Q99990 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
VGLL1Q99990 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC11.61□□□□□ -0.55
VGLL1Q99990 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC11.61□□□□□ -0.55
VGLL1Q99990 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
VGLL1Q99990 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC11.61□□□□□ -0.55
VGLL1Q99990 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
VGLL1Q99990 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
VGLL1Q99990 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC11.61□□□□□ -0.55
VGLL1Q99990 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
VGLL1Q99990 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
VGLL1Q99990 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VGLL1Q99990 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VGLL1Q99990 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
VGLL1Q99990 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VGLL1Q99990 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VGLL1Q99990 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
VGLL1Q99990 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC11.61□□□□□ -0.55
VGLL1Q99990 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
VGLL1Q99990 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
VGLL1Q99990 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
VGLL1Q99990 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
VGLL1Q99990 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
VGLL1Q99990 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
VGLL1Q99990 AC097359.2-201ENST00000604992 2389 ntBASIC11.61□□□□□ -0.55
VGLL1Q99990 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
VGLL1Q99990 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC11.6□□□□□ -0.55
VGLL1Q99990 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
VGLL1Q99990 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC11.6□□□□□ -0.55
VGLL1Q99990 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
VGLL1Q99990 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
VGLL1Q99990 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
VGLL1Q99990 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC11.6□□□□□ -0.55
VGLL1Q99990 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC11.6□□□□□ -0.55
VGLL1Q99990 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
VGLL1Q99990 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
VGLL1Q99990 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC11.6□□□□□ -0.55
VGLL1Q99990 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
VGLL1Q99990 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC11.6□□□□□ -0.55
VGLL1Q99990 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
VGLL1Q99990 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC11.6□□□□□ -0.55
VGLL1Q99990 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
VGLL1Q99990 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
VGLL1Q99990 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
VGLL1Q99990 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
VGLL1Q99990 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC11.6□□□□□ -0.55
VGLL1Q99990 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
VGLL1Q99990 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
VGLL1Q99990 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
VGLL1Q99990 AC041040.2-201ENST00000622926 2899 ntBASIC11.6□□□□□ -0.55
VGLL1Q99990 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
VGLL1Q99990 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
VGLL1Q99990 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
VGLL1Q99990 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC11.6□□□□□ -0.55
VGLL1Q99990 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
VGLL1Q99990 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
VGLL1Q99990 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
VGLL1Q99990 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
VGLL1Q99990 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
VGLL1Q99990 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
VGLL1Q99990 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC11.6□□□□□ -0.55
VGLL1Q99990 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC11.6□□□□□ -0.55
VGLL1Q99990 KRT18P64-201ENST00000434946 1219 ntBASIC11.6□□□□□ -0.55
VGLL1Q99990 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
VGLL1Q99990 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC11.6□□□□□ -0.55
VGLL1Q99990 AC093520.2-201ENST00000561830 333 ntBASIC11.6□□□□□ -0.55
VGLL1Q99990 AC015910.1-201ENST00000579400 975 ntBASIC11.6□□□□□ -0.55
VGLL1Q99990 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC11.6□□□□□ -0.55
VGLL1Q99990 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC11.6□□□□□ -0.55
VGLL1Q99990 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC11.6□□□□□ -0.55
VGLL1Q99990 AC007967.4-201ENST00000614700 386 ntBASIC11.6□□□□□ -0.55
VGLL1Q99990 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
VGLL1Q99990 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
VGLL1Q99990 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC11.6□□□□□ -0.55
VGLL1Q99990 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
VGLL1Q99990 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
VGLL1Q99990 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC11.6□□□□□ -0.55
VGLL1Q99990 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
VGLL1Q99990 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
VGLL1Q99990 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
VGLL1Q99990 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
VGLL1Q99990 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
VGLL1Q99990 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC11.6□□□□□ -0.55
VGLL1Q99990 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC11.6□□□□□ -0.55
VGLL1Q99990 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
VGLL1Q99990 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
VGLL1Q99990 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
VGLL1Q99990 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
VGLL1Q99990 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms