Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC11.16□□□□□ -0.62
MUC4Q99102 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
MUC4Q99102 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
MUC4Q99102 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
MUC4Q99102 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
MUC4Q99102 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
MUC4Q99102 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
MUC4Q99102 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC11.16□□□□□ -0.62
MUC4Q99102 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
MUC4Q99102 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
MUC4Q99102 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
MUC4Q99102 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC11.16□□□□□ -0.62
MUC4Q99102 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.62
MUC4Q99102 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
MUC4Q99102 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
MUC4Q99102 CENPM-206ENST00000407253 818 ntTSL 2 BASIC11.16□□□□□ -0.62
MUC4Q99102 AC074338.1-201ENST00000416825 156 ntBASIC11.16□□□□□ -0.62
MUC4Q99102 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
MUC4Q99102 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC11.16□□□□□ -0.62
MUC4Q99102 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC11.16□□□□□ -0.62
MUC4Q99102 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC11.16□□□□□ -0.62
MUC4Q99102 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC11.16□□□□□ -0.62
MUC4Q99102 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC11.16□□□□□ -0.62
MUC4Q99102 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC11.16□□□□□ -0.62
MUC4Q99102 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC11.16□□□□□ -0.62
MUC4Q99102 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
MUC4Q99102 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
MUC4Q99102 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
MUC4Q99102 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC11.16□□□□□ -0.62
MUC4Q99102 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC11.16□□□□□ -0.62
MUC4Q99102 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
MUC4Q99102 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
MUC4Q99102 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
MUC4Q99102 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC11.16□□□□□ -0.62
MUC4Q99102 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
MUC4Q99102 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
MUC4Q99102 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC11.16□□□□□ -0.62
MUC4Q99102 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC11.16□□□□□ -0.62
MUC4Q99102 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC11.16□□□□□ -0.62
MUC4Q99102 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC11.16□□□□□ -0.62
MUC4Q99102 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
MUC4Q99102 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
MUC4Q99102 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC11.16□□□□□ -0.62
MUC4Q99102 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
MUC4Q99102 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
MUC4Q99102 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
MUC4Q99102 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
MUC4Q99102 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC11.16□□□□□ -0.62
MUC4Q99102 BTBD7P1-201ENST00000447253 1453 ntBASIC11.16□□□□□ -0.62
MUC4Q99102 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
MUC4Q99102 UBE3A-226ENST00000637886 8725 ntAPPRIS ALT1 TSL 5 BASIC11.16□□□□□ -0.62
MUC4Q99102 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
MUC4Q99102 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
MUC4Q99102 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC11.16□□□□□ -0.62
MUC4Q99102 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC11.16□□□□□ -0.62
MUC4Q99102 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
MUC4Q99102 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
MUC4Q99102 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC11.16□□□□□ -0.62
MUC4Q99102 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
MUC4Q99102 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
MUC4Q99102 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
MUC4Q99102 RPL37AP1-201ENST00000412502 279 ntBASIC11.16□□□□□ -0.62
MUC4Q99102 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
MUC4Q99102 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC11.16□□□□□ -0.62
MUC4Q99102 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC11.16□□□□□ -0.62
MUC4Q99102 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
MUC4Q99102 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
MUC4Q99102 SF1-209ENST00000433274 2317 ntTSL 2 BASIC11.16□□□□□ -0.62
MUC4Q99102 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC11.15□□□□□ -0.62
MUC4Q99102 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
MUC4Q99102 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC11.15□□□□□ -0.62
MUC4Q99102 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC11.15□□□□□ -0.62
MUC4Q99102 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC11.15□□□□□ -0.62
MUC4Q99102 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC11.15□□□□□ -0.62
MUC4Q99102 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
MUC4Q99102 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
MUC4Q99102 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
MUC4Q99102 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
MUC4Q99102 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
MUC4Q99102 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
MUC4Q99102 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
MUC4Q99102 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
MUC4Q99102 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
MUC4Q99102 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC11.15□□□□□ -0.62
MUC4Q99102 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC11.15□□□□□ -0.62
MUC4Q99102 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
MUC4Q99102 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
MUC4Q99102 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
MUC4Q99102 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC11.15□□□□□ -0.62
MUC4Q99102 AC044860.1-202ENST00000559481 777 ntBASIC11.15□□□□□ -0.62
MUC4Q99102 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC11.15□□□□□ -0.62
MUC4Q99102 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC11.15□□□□□ -0.62
MUC4Q99102 AL033527.4-201ENST00000641026 673 ntBASIC11.15□□□□□ -0.62
MUC4Q99102 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC11.15□□□□□ -0.62
MUC4Q99102 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
MUC4Q99102 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
MUC4Q99102 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
MUC4Q99102 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
MUC4Q99102 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
MUC4Q99102 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms