Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 PAUPAR-201ENST00000630360 2965 ntBASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CDK5RAP1Q96SZ6 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDK5RAP1Q96SZ6 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDK5RAP1Q96SZ6 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.74■□□□□ 0.11
CDK5RAP1Q96SZ6 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDK5RAP1Q96SZ6 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
CDK5RAP1Q96SZ6 AP000845.1-201ENST00000581677 2131 ntBASIC15.74■□□□□ 0.11
CDK5RAP1Q96SZ6 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CDK5RAP1Q96SZ6 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CDK5RAP1Q96SZ6 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDK5RAP1Q96SZ6 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CDK5RAP1Q96SZ6 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CDK5RAP1Q96SZ6 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDK5RAP1Q96SZ6 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDK5RAP1Q96SZ6 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDK5RAP1Q96SZ6 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.74■□□□□ 0.11
CDK5RAP1Q96SZ6 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.74■□□□□ 0.11
CDK5RAP1Q96SZ6 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDK5RAP1Q96SZ6 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDK5RAP1Q96SZ6 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDK5RAP1Q96SZ6 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDK5RAP1Q96SZ6 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.74■□□□□ 0.11
CDK5RAP1Q96SZ6 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.74■□□□□ 0.11
CDK5RAP1Q96SZ6 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDK5RAP1Q96SZ6 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CDK5RAP1Q96SZ6 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDK5RAP1Q96SZ6 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDK5RAP1Q96SZ6 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDK5RAP1Q96SZ6 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.74■□□□□ 0.11
CDK5RAP1Q96SZ6 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.74■□□□□ 0.11
CDK5RAP1Q96SZ6 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.74■□□□□ 0.11
CDK5RAP1Q96SZ6 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.74■□□□□ 0.11
CDK5RAP1Q96SZ6 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDK5RAP1Q96SZ6 AC138466.3-201ENST00000619983 221 ntBASIC15.74■□□□□ 0.11
CDK5RAP1Q96SZ6 AL033527.4-201ENST00000641026 673 ntBASIC15.74■□□□□ 0.11
CDK5RAP1Q96SZ6 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDK5RAP1Q96SZ6 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDK5RAP1Q96SZ6 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CDK5RAP1Q96SZ6 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDK5RAP1Q96SZ6 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDK5RAP1Q96SZ6 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDK5RAP1Q96SZ6 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.74■□□□□ 0.11
CDK5RAP1Q96SZ6 AC132872.4-202ENST00000622924 2756 ntBASIC15.74■□□□□ 0.11
CDK5RAP1Q96SZ6 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.74■□□□□ 0.11
CDK5RAP1Q96SZ6 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDK5RAP1Q96SZ6 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CDK5RAP1Q96SZ6 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDK5RAP1Q96SZ6 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.74■□□□□ 0.11
CDK5RAP1Q96SZ6 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.74■□□□□ 0.11
CDK5RAP1Q96SZ6 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.74■□□□□ 0.11
CDK5RAP1Q96SZ6 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CDK5RAP1Q96SZ6 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.74■□□□□ 0.11
CDK5RAP1Q96SZ6 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CDK5RAP1Q96SZ6 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CDK5RAP1Q96SZ6 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDK5RAP1Q96SZ6 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CDK5RAP1Q96SZ6 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDK5RAP1Q96SZ6 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CDK5RAP1Q96SZ6 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.73■□□□□ 0.11
CDK5RAP1Q96SZ6 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CDK5RAP1Q96SZ6 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDK5RAP1Q96SZ6 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDK5RAP1Q96SZ6 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CDK5RAP1Q96SZ6 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDK5RAP1Q96SZ6 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.73■□□□□ 0.11
CDK5RAP1Q96SZ6 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDK5RAP1Q96SZ6 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDK5RAP1Q96SZ6 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDK5RAP1Q96SZ6 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDK5RAP1Q96SZ6 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDK5RAP1Q96SZ6 HOMER2P2-201ENST00000451621 847 ntBASIC15.73■□□□□ 0.11
CDK5RAP1Q96SZ6 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC15.73■□□□□ 0.11
CDK5RAP1Q96SZ6 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.73■□□□□ 0.11
CDK5RAP1Q96SZ6 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDK5RAP1Q96SZ6 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.73■□□□□ 0.11
CDK5RAP1Q96SZ6 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.73■□□□□ 0.11
CDK5RAP1Q96SZ6 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDK5RAP1Q96SZ6 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDK5RAP1Q96SZ6 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDK5RAP1Q96SZ6 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDK5RAP1Q96SZ6 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.73■□□□□ 0.11
CDK5RAP1Q96SZ6 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CDK5RAP1Q96SZ6 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.73■□□□□ 0.11
CDK5RAP1Q96SZ6 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDK5RAP1Q96SZ6 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.73■□□□□ 0.11
CDK5RAP1Q96SZ6 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDK5RAP1Q96SZ6 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDK5RAP1Q96SZ6 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CDK5RAP1Q96SZ6 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDK5RAP1Q96SZ6 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDK5RAP1Q96SZ6 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CDK5RAP1Q96SZ6 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.72■□□□□ 0.11
CDK5RAP1Q96SZ6 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms