Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC21.07■□□□□ 0.96
CCDC7Q96M83 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC7Q96M83 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC7Q96M83 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC7Q96M83 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC7Q96M83 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC7Q96M83 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC7Q96M83 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
CCDC7Q96M83 AP002414.2-201ENST00000591780 3365 ntBASIC21.06■□□□□ 0.96
CCDC7Q96M83 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC7Q96M83 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC7Q96M83 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC7Q96M83 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC7Q96M83 RPS15-201ENST00000233609 534 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC7Q96M83 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC7Q96M83 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC7Q96M83 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
CCDC7Q96M83 AC106760.1-201ENST00000508690 800 ntBASIC21.06■□□□□ 0.96
CCDC7Q96M83 AC022616.1-201ENST00000518688 554 ntBASIC21.06■□□□□ 0.96
CCDC7Q96M83 RIT1-205ENST00000539040 919 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC7Q96M83 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC7Q96M83 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC21.06■□□□□ 0.96
CCDC7Q96M83 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC21.06■□□□□ 0.96
CCDC7Q96M83 GNRHR2-203ENST00000581100 1187 ntBASIC21.06■□□□□ 0.96
CCDC7Q96M83 RPS15-205ENST00000586686 562 ntTSL 5 BASIC21.06■□□□□ 0.96
CCDC7Q96M83 RPS15-208ENST00000591804 711 ntTSL 5 BASIC21.06■□□□□ 0.96
CCDC7Q96M83 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC7Q96M83 AC010328.2-201ENST00000597698 1111 ntBASIC21.06■□□□□ 0.96
CCDC7Q96M83 RHOXF1P1-202ENST00000635473 501 ntBASIC21.06■□□□□ 0.96
CCDC7Q96M83 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC7Q96M83 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC7Q96M83 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
CCDC7Q96M83 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
CCDC7Q96M83 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC7Q96M83 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC21.06■□□□□ 0.96
CCDC7Q96M83 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC7Q96M83 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC7Q96M83 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
CCDC7Q96M83 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC7Q96M83 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC7Q96M83 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC7Q96M83 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC7Q96M83 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC21.05■□□□□ 0.96
CCDC7Q96M83 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CCDC7Q96M83 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CCDC7Q96M83 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC7Q96M83 AC016694.1-201ENST00000434179 700 ntBASIC21.05■□□□□ 0.96
CCDC7Q96M83 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC21.05■□□□□ 0.96
CCDC7Q96M83 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC7Q96M83 TPI1-206ENST00000488464 791 ntTSL 5 BASIC21.05■□□□□ 0.96
CCDC7Q96M83 ZNF767P-206ENST00000513792 565 ntBASIC21.05■□□□□ 0.96
CCDC7Q96M83 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC7Q96M83 RPS15-202ENST00000585665 467 ntTSL 3 BASIC21.05■□□□□ 0.96
CCDC7Q96M83 AC243960.2-201ENST00000600996 747 ntBASIC21.05■□□□□ 0.96
CCDC7Q96M83 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC21.05■□□□□ 0.96
CCDC7Q96M83 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
CCDC7Q96M83 AC009542.2-202ENST00000619004 1067 ntBASIC21.05■□□□□ 0.96
CCDC7Q96M83 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CCDC7Q96M83 KRT8P35-201ENST00000483942 1338 ntBASIC21.05■□□□□ 0.96
CCDC7Q96M83 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC7Q96M83 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC7Q96M83 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CCDC7Q96M83 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC21.05■□□□□ 0.96
CCDC7Q96M83 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC7Q96M83 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC7Q96M83 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
CCDC7Q96M83 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
CCDC7Q96M83 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC7Q96M83 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC7Q96M83 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC7Q96M83 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC21.04■□□□□ 0.96
CCDC7Q96M83 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
CCDC7Q96M83 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC7Q96M83 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
CCDC7Q96M83 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
CCDC7Q96M83 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
CCDC7Q96M83 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC7Q96M83 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC7Q96M83 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC7Q96M83 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC7Q96M83 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC7Q96M83 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC7Q96M83 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC7Q96M83 GPAA1P2-201ENST00000417923 928 ntBASIC21.04■□□□□ 0.96
CCDC7Q96M83 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
CCDC7Q96M83 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC21.04■□□□□ 0.96
CCDC7Q96M83 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC7Q96M83 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC21.04■□□□□ 0.96
CCDC7Q96M83 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC21.04■□□□□ 0.96
CCDC7Q96M83 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC21.04■□□□□ 0.96
CCDC7Q96M83 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC7Q96M83 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC7Q96M83 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
CCDC7Q96M83 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC21.04■□□□□ 0.96
CCDC7Q96M83 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC7Q96M83 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC7Q96M83 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
CCDC7Q96M83 AC232323.1-201ENST00000540724 2099 ntBASIC21.04■□□□□ 0.96
CCDC7Q96M83 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
CCDC7Q96M83 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms