Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC16.06■□□□□ 0.16
ALPK3Q96L96 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ALPK3Q96L96 HELLS-212ENST00000630929 400 ntTSL 5 BASIC16.06■□□□□ 0.16
ALPK3Q96L96 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ALPK3Q96L96 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ALPK3Q96L96 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ALPK3Q96L96 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
ALPK3Q96L96 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ALPK3Q96L96 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
ALPK3Q96L96 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
ALPK3Q96L96 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
ALPK3Q96L96 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
ALPK3Q96L96 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
ALPK3Q96L96 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC16.06■□□□□ 0.16
ALPK3Q96L96 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC16.06■□□□□ 0.16
ALPK3Q96L96 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC16.06■□□□□ 0.16
ALPK3Q96L96 ST13P19-201ENST00000442505 1124 ntBASIC16.06■□□□□ 0.16
ALPK3Q96L96 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC16.06■□□□□ 0.16
ALPK3Q96L96 ANAPC15-204ENST00000535234 848 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
ALPK3Q96L96 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC16.06■□□□□ 0.16
ALPK3Q96L96 AC023968.2-201ENST00000560593 1049 ntBASIC16.06■□□□□ 0.16
ALPK3Q96L96 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC16.06■□□□□ 0.16
ALPK3Q96L96 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
ALPK3Q96L96 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.05■□□□□ 0.16
ALPK3Q96L96 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ALPK3Q96L96 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
ALPK3Q96L96 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ALPK3Q96L96 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ALPK3Q96L96 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ALPK3Q96L96 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ALPK3Q96L96 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ALPK3Q96L96 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
ALPK3Q96L96 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
ALPK3Q96L96 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ALPK3Q96L96 MIR1301-201ENST00000408518 82 ntBASIC16.05■□□□□ 0.16
ALPK3Q96L96 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC16.05■□□□□ 0.16
ALPK3Q96L96 HLA-DPA2-205ENST00000433582 733 ntBASIC16.05■□□□□ 0.16
ALPK3Q96L96 IGHV1-12-201ENST00000518307 205 ntBASIC16.05■□□□□ 0.16
ALPK3Q96L96 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ALPK3Q96L96 AL162632.1-201ENST00000546784 548 ntTSL 4 BASIC16.05■□□□□ 0.16
ALPK3Q96L96 CYP4F36P-201ENST00000589193 186 ntBASIC16.05■□□□□ 0.16
ALPK3Q96L96 AC008972.2-201ENST00000606587 494 ntBASIC16.05■□□□□ 0.16
ALPK3Q96L96 AC020904.3-201ENST00000624199 442 ntBASIC16.05■□□□□ 0.16
ALPK3Q96L96 RARS-210ENST00000626454 177 ntTSL 5 BASIC16.05■□□□□ 0.16
ALPK3Q96L96 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC16.05■□□□□ 0.16
ALPK3Q96L96 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC16.05■□□□□ 0.16
ALPK3Q96L96 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
ALPK3Q96L96 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ALPK3Q96L96 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ALPK3Q96L96 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ALPK3Q96L96 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ALPK3Q96L96 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
ALPK3Q96L96 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
ALPK3Q96L96 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.05■□□□□ 0.16
ALPK3Q96L96 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
ALPK3Q96L96 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
ALPK3Q96L96 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ALPK3Q96L96 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ALPK3Q96L96 AC023090.2-201ENST00000625182 2110 ntBASIC16.04■□□□□ 0.16
ALPK3Q96L96 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
ALPK3Q96L96 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ALPK3Q96L96 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ALPK3Q96L96 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.04■□□□□ 0.16
ALPK3Q96L96 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ALPK3Q96L96 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
ALPK3Q96L96 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC16.04■□□□□ 0.16
ALPK3Q96L96 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
ALPK3Q96L96 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
ALPK3Q96L96 JTB-202ENST00000356648 1040 ntTSL 2 BASIC16.04■□□□□ 0.16
ALPK3Q96L96 PIFO-201ENST00000369737 746 ntTSL 2 BASIC16.04■□□□□ 0.16
ALPK3Q96L96 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC16.04■□□□□ 0.16
ALPK3Q96L96 GEMIN8P4-201ENST00000380526 729 ntBASIC16.04■□□□□ 0.16
ALPK3Q96L96 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ALPK3Q96L96 CSNK1G2P1-201ENST00000442675 955 ntBASIC16.04■□□□□ 0.16
ALPK3Q96L96 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC16.04■□□□□ 0.16
ALPK3Q96L96 RN7SL277P-201ENST00000481521 288 ntBASIC16.04■□□□□ 0.16
ALPK3Q96L96 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC16.04■□□□□ 0.16
ALPK3Q96L96 RN7SL582P-201ENST00000491078 279 ntBASIC16.04■□□□□ 0.16
ALPK3Q96L96 GDNF-207ENST00000515058 764 ntTSL 5 BASIC16.04■□□□□ 0.16
ALPK3Q96L96 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
ALPK3Q96L96 AC007250.1-201ENST00000608934 338 ntBASIC16.04■□□□□ 0.16
ALPK3Q96L96 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
ALPK3Q96L96 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ALPK3Q96L96 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.04■□□□□ 0.16
ALPK3Q96L96 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.04■□□□□ 0.16
ALPK3Q96L96 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ALPK3Q96L96 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ALPK3Q96L96 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ALPK3Q96L96 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
ALPK3Q96L96 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.04■□□□□ 0.16
ALPK3Q96L96 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC16.04■□□□□ 0.16
ALPK3Q96L96 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
ALPK3Q96L96 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC16.04■□□□□ 0.16
ALPK3Q96L96 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC16.04■□□□□ 0.16
ALPK3Q96L96 NIFK-AS1-203ENST00000419902 1316 ntTSL 2 BASIC16.04■□□□□ 0.16
ALPK3Q96L96 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC16.04■□□□□ 0.16
ALPK3Q96L96 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC16.04■□□□□ 0.16
ALPK3Q96L96 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
ALPK3Q96L96 OR8T1P-201ENST00000421347 918 ntBASIC16.04■□□□□ 0.16
ALPK3Q96L96 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 220.2 ms