Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DDX11Q96FC9 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
DDX11Q96FC9 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
DDX11Q96FC9 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC18.11■□□□□ 0.49
DDX11Q96FC9 RPL5P21-201ENST00000404620 815 ntBASIC18.11■□□□□ 0.49
DDX11Q96FC9 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
DDX11Q96FC9 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC18.11■□□□□ 0.49
DDX11Q96FC9 AL359711.2-201ENST00000563105 872 ntBASIC18.11■□□□□ 0.49
DDX11Q96FC9 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC18.11■□□□□ 0.49
DDX11Q96FC9 AC233724.13-201ENST00000598383 410 ntBASIC18.11■□□□□ 0.49
DDX11Q96FC9 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
DDX11Q96FC9 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC18.11■□□□□ 0.49
DDX11Q96FC9 AC018665.1-201ENST00000622927 1362 ntBASIC18.11■□□□□ 0.49
DDX11Q96FC9 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC18.11■□□□□ 0.49
DDX11Q96FC9 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
DDX11Q96FC9 AL121723.1-201ENST00000445194 1519 ntBASIC18.11■□□□□ 0.49
DDX11Q96FC9 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC18.11■□□□□ 0.49
DDX11Q96FC9 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
DDX11Q96FC9 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
DDX11Q96FC9 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
DDX11Q96FC9 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DDX11Q96FC9 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
DDX11Q96FC9 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DDX11Q96FC9 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DDX11Q96FC9 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DDX11Q96FC9 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
DDX11Q96FC9 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
DDX11Q96FC9 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
DDX11Q96FC9 CICP23-201ENST00000605013 2741 ntBASIC18.1■□□□□ 0.49
DDX11Q96FC9 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC18.1■□□□□ 0.49
DDX11Q96FC9 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
DDX11Q96FC9 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC18.1■□□□□ 0.49
DDX11Q96FC9 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC18.1■□□□□ 0.49
DDX11Q96FC9 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX11Q96FC9 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
DDX11Q96FC9 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC18.1■□□□□ 0.49
DDX11Q96FC9 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC18.1■□□□□ 0.49
DDX11Q96FC9 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
DDX11Q96FC9 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
DDX11Q96FC9 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX11Q96FC9 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC18.1■□□□□ 0.49
DDX11Q96FC9 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.1■□□□□ 0.49
DDX11Q96FC9 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC18.1■□□□□ 0.49
DDX11Q96FC9 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
DDX11Q96FC9 TOMM22P5-201ENST00000416399 439 ntBASIC18.1■□□□□ 0.49
DDX11Q96FC9 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC18.1■□□□□ 0.49
DDX11Q96FC9 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
DDX11Q96FC9 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC18.1■□□□□ 0.49
DDX11Q96FC9 AC119751.2-201ENST00000504529 210 ntBASIC18.1■□□□□ 0.49
DDX11Q96FC9 USP32P1-208ENST00000506594 1164 ntBASIC18.1■□□□□ 0.49
DDX11Q96FC9 TDH-203ENST00000531764 1110 ntBASIC18.1■□□□□ 0.49
DDX11Q96FC9 SNX29P1-201ENST00000548357 1007 ntBASIC18.1■□□□□ 0.49
DDX11Q96FC9 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC18.1■□□□□ 0.49
DDX11Q96FC9 BRI3BPP1-201ENST00000594224 787 ntBASIC18.1■□□□□ 0.49
DDX11Q96FC9 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
DDX11Q96FC9 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX11Q96FC9 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX11Q96FC9 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX11Q96FC9 AJ011931.1-201ENST00000618749 2492 ntBASIC18.1■□□□□ 0.49
DDX11Q96FC9 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
DDX11Q96FC9 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX11Q96FC9 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
DDX11Q96FC9 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX11Q96FC9 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
DDX11Q96FC9 PCDHA3-202ENST00000532566 4594 ntBASIC18.1■□□□□ 0.49
DDX11Q96FC9 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
DDX11Q96FC9 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
DDX11Q96FC9 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
DDX11Q96FC9 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDX11Q96FC9 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
DDX11Q96FC9 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDX11Q96FC9 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC18.09■□□□□ 0.49
DDX11Q96FC9 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDX11Q96FC9 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDX11Q96FC9 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
DDX11Q96FC9 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDX11Q96FC9 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC18.09■□□□□ 0.49
DDX11Q96FC9 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDX11Q96FC9 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDX11Q96FC9 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDX11Q96FC9 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDX11Q96FC9 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDX11Q96FC9 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDX11Q96FC9 APOA1-205ENST00000375329 927 ntTSL 2 BASIC18.09■□□□□ 0.49
DDX11Q96FC9 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDX11Q96FC9 MPV17-208ENST00000405076 603 ntTSL 5 BASIC18.09■□□□□ 0.49
DDX11Q96FC9 AC134915.1-201ENST00000426461 574 ntBASIC18.09■□□□□ 0.49
DDX11Q96FC9 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
DDX11Q96FC9 ACTG1P3-201ENST00000431775 1114 ntBASIC18.09■□□□□ 0.49
DDX11Q96FC9 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC18.09■□□□□ 0.49
DDX11Q96FC9 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC18.09■□□□□ 0.49
DDX11Q96FC9 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC18.09■□□□□ 0.49
DDX11Q96FC9 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC18.09■□□□□ 0.49
DDX11Q96FC9 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC18.09■□□□□ 0.49
DDX11Q96FC9 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC18.09■□□□□ 0.49
DDX11Q96FC9 RPSAP52-203ENST00000622976 1023 ntBASIC18.09■□□□□ 0.49
DDX11Q96FC9 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
DDX11Q96FC9 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
DDX11Q96FC9 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
DDX11Q96FC9 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms