Protein–RNA interactions for Protein: Q96C10

DHX58, Probable ATP-dependent RNA helicase DHX58, humanhuman

Predictions only

Length 678 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX58Q96C10 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC17.21■□□□□ 0.35
DHX58Q96C10 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
DHX58Q96C10 GNAQP1-201ENST00000444815 1067 ntBASIC17.21■□□□□ 0.35
DHX58Q96C10 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
DHX58Q96C10 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.21■□□□□ 0.35
DHX58Q96C10 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DHX58Q96C10 AL049840.4-201ENST00000602422 811 ntBASIC17.21■□□□□ 0.35
DHX58Q96C10 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DHX58Q96C10 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DHX58Q96C10 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DHX58Q96C10 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
DHX58Q96C10 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
DHX58Q96C10 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
DHX58Q96C10 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC17.21■□□□□ 0.35
DHX58Q96C10 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DHX58Q96C10 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
DHX58Q96C10 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
DHX58Q96C10 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
DHX58Q96C10 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
DHX58Q96C10 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
DHX58Q96C10 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DHX58Q96C10 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DHX58Q96C10 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DHX58Q96C10 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
DHX58Q96C10 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
DHX58Q96C10 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
DHX58Q96C10 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC17.2■□□□□ 0.34
DHX58Q96C10 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
DHX58Q96C10 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DHX58Q96C10 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.2■□□□□ 0.34
DHX58Q96C10 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
DHX58Q96C10 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
DHX58Q96C10 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DHX58Q96C10 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
DHX58Q96C10 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.2■□□□□ 0.34
DHX58Q96C10 GGCT-205ENST00000409436 954 ntTSL 3 BASIC17.2■□□□□ 0.34
DHX58Q96C10 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.2■□□□□ 0.34
DHX58Q96C10 PMS2P2-201ENST00000425039 1128 ntBASIC17.2■□□□□ 0.34
DHX58Q96C10 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC17.2■□□□□ 0.34
DHX58Q96C10 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.2■□□□□ 0.34
DHX58Q96C10 VDAC1P7-201ENST00000462417 847 ntBASIC17.2■□□□□ 0.34
DHX58Q96C10 RN7SL399P-201ENST00000471648 279 ntBASIC17.2■□□□□ 0.34
DHX58Q96C10 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.2■□□□□ 0.34
DHX58Q96C10 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.2■□□□□ 0.34
DHX58Q96C10 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.2■□□□□ 0.34
DHX58Q96C10 AC107373.2-201ENST00000607735 490 ntBASIC17.2■□□□□ 0.34
DHX58Q96C10 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
DHX58Q96C10 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
DHX58Q96C10 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
DHX58Q96C10 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
DHX58Q96C10 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC17.2■□□□□ 0.34
DHX58Q96C10 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
DHX58Q96C10 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DHX58Q96C10 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.2■□□□□ 0.34
DHX58Q96C10 BANP-203ENST00000393207 2438 ntTSL 2 BASIC17.2■□□□□ 0.34
DHX58Q96C10 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.2■□□□□ 0.34
DHX58Q96C10 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DHX58Q96C10 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DHX58Q96C10 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DHX58Q96C10 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
DHX58Q96C10 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
DHX58Q96C10 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DHX58Q96C10 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
DHX58Q96C10 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC17.2■□□□□ 0.34
DHX58Q96C10 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC17.2■□□□□ 0.34
DHX58Q96C10 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
DHX58Q96C10 UCKL1-AS1-201ENST00000623569 3602 ntBASIC17.2■□□□□ 0.34
DHX58Q96C10 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC17.2■□□□□ 0.34
DHX58Q96C10 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
DHX58Q96C10 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
DHX58Q96C10 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
DHX58Q96C10 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
DHX58Q96C10 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
DHX58Q96C10 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DHX58Q96C10 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DHX58Q96C10 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
DHX58Q96C10 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
DHX58Q96C10 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
DHX58Q96C10 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
DHX58Q96C10 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DHX58Q96C10 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DHX58Q96C10 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
DHX58Q96C10 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DHX58Q96C10 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
DHX58Q96C10 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.19■□□□□ 0.34
DHX58Q96C10 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.19■□□□□ 0.34
DHX58Q96C10 RHOA-206ENST00000454011 889 ntTSL 2 BASIC17.19■□□□□ 0.34
DHX58Q96C10 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.19■□□□□ 0.34
DHX58Q96C10 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.19■□□□□ 0.34
DHX58Q96C10 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DHX58Q96C10 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
DHX58Q96C10 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DHX58Q96C10 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
DHX58Q96C10 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
DHX58Q96C10 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
DHX58Q96C10 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DHX58Q96C10 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DHX58Q96C10 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
DHX58Q96C10 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
DHX58Q96C10 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms