Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC13.57□□□□□ -0.24
RFT1Q96AA3 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.57□□□□□ -0.24
RFT1Q96AA3 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RFT1Q96AA3 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC13.57□□□□□ -0.24
RFT1Q96AA3 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.57□□□□□ -0.24
RFT1Q96AA3 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.57□□□□□ -0.24
RFT1Q96AA3 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.57□□□□□ -0.24
RFT1Q96AA3 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RFT1Q96AA3 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.57□□□□□ -0.24
RFT1Q96AA3 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RFT1Q96AA3 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RFT1Q96AA3 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RFT1Q96AA3 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RFT1Q96AA3 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.57□□□□□ -0.24
RFT1Q96AA3 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RFT1Q96AA3 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.57□□□□□ -0.24
RFT1Q96AA3 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RFT1Q96AA3 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
RFT1Q96AA3 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
RFT1Q96AA3 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RFT1Q96AA3 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
RFT1Q96AA3 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
RFT1Q96AA3 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RFT1Q96AA3 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.57□□□□□ -0.24
RFT1Q96AA3 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RFT1Q96AA3 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
RFT1Q96AA3 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RFT1Q96AA3 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
RFT1Q96AA3 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC13.56□□□□□ -0.24
RFT1Q96AA3 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RFT1Q96AA3 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.56□□□□□ -0.24
RFT1Q96AA3 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RFT1Q96AA3 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
RFT1Q96AA3 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RFT1Q96AA3 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RFT1Q96AA3 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
RFT1Q96AA3 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
RFT1Q96AA3 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
RFT1Q96AA3 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RFT1Q96AA3 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
RFT1Q96AA3 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.56□□□□□ -0.24
RFT1Q96AA3 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RFT1Q96AA3 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
RFT1Q96AA3 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RFT1Q96AA3 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RFT1Q96AA3 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RFT1Q96AA3 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.56□□□□□ -0.24
RFT1Q96AA3 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.56□□□□□ -0.24
RFT1Q96AA3 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RFT1Q96AA3 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
RFT1Q96AA3 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
RFT1Q96AA3 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RFT1Q96AA3 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RFT1Q96AA3 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RFT1Q96AA3 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RFT1Q96AA3 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC13.56□□□□□ -0.24
RFT1Q96AA3 MCCD1P2-201ENST00000423228 335 ntBASIC13.56□□□□□ -0.24
RFT1Q96AA3 HTR5BP-201ENST00000430851 1154 ntBASIC13.56□□□□□ -0.24
RFT1Q96AA3 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
RFT1Q96AA3 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
RFT1Q96AA3 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.56□□□□□ -0.24
RFT1Q96AA3 KRT18P58-201ENST00000527480 1120 ntBASIC13.56□□□□□ -0.24
RFT1Q96AA3 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.56□□□□□ -0.24
RFT1Q96AA3 KRT8P23-201ENST00000560090 1207 ntBASIC13.56□□□□□ -0.24
RFT1Q96AA3 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.56□□□□□ -0.24
RFT1Q96AA3 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC13.56□□□□□ -0.24
RFT1Q96AA3 AC026979.3-201ENST00000607315 403 ntBASIC13.56□□□□□ -0.24
RFT1Q96AA3 C20orf181-201ENST00000623918 480 ntBASIC13.56□□□□□ -0.24
RFT1Q96AA3 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
RFT1Q96AA3 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.56□□□□□ -0.24
RFT1Q96AA3 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RFT1Q96AA3 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RFT1Q96AA3 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RFT1Q96AA3 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RFT1Q96AA3 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
RFT1Q96AA3 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
RFT1Q96AA3 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.56□□□□□ -0.24
RFT1Q96AA3 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.56□□□□□ -0.24
RFT1Q96AA3 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
RFT1Q96AA3 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RFT1Q96AA3 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RFT1Q96AA3 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RFT1Q96AA3 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.56□□□□□ -0.24
RFT1Q96AA3 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.56□□□□□ -0.24
RFT1Q96AA3 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
RFT1Q96AA3 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
RFT1Q96AA3 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RFT1Q96AA3 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RFT1Q96AA3 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.55□□□□□ -0.24
RFT1Q96AA3 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RFT1Q96AA3 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
RFT1Q96AA3 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.55□□□□□ -0.24
RFT1Q96AA3 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RFT1Q96AA3 CICP8-201ENST00000455800 2813 ntBASIC13.55□□□□□ -0.24
RFT1Q96AA3 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RFT1Q96AA3 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
RFT1Q96AA3 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
RFT1Q96AA3 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
RFT1Q96AA3 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC13.55□□□□□ -0.24
RFT1Q96AA3 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms