Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
TRIM41Q8WV44 LCK-206ENST00000373564 2137 ntTSL 5 BASIC25.85■■□□□ 1.73
TRIM41Q8WV44 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC25.85■■□□□ 1.73
TRIM41Q8WV44 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC25.85■■□□□ 1.73
TRIM41Q8WV44 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
TRIM41Q8WV44 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
TRIM41Q8WV44 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
TRIM41Q8WV44 KRT8P14-201ENST00000414254 1442 ntBASIC25.84■■□□□ 1.73
TRIM41Q8WV44 AL008707.1-201ENST00000422498 534 ntBASIC25.84■■□□□ 1.73
TRIM41Q8WV44 GHSR-202ENST00000427970 912 ntBASIC25.84■■□□□ 1.73
TRIM41Q8WV44 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
TRIM41Q8WV44 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC25.84■■□□□ 1.73
TRIM41Q8WV44 IGHV3-37-201ENST00000518544 340 ntBASIC25.84■■□□□ 1.73
TRIM41Q8WV44 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC25.84■■□□□ 1.73
TRIM41Q8WV44 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
TRIM41Q8WV44 FUK-207ENST00000571514 3054 ntTSL 2 BASIC25.84■■□□□ 1.73
TRIM41Q8WV44 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC25.84■■□□□ 1.73
TRIM41Q8WV44 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC25.84■■□□□ 1.73
TRIM41Q8WV44 PTPN20CP-201ENST00000614090 920 ntBASIC25.84■■□□□ 1.73
TRIM41Q8WV44 SLC9A7P1-202ENST00000556476 2239 ntBASIC25.84■■□□□ 1.73
TRIM41Q8WV44 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
TRIM41Q8WV44 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC25.84■■□□□ 1.73
TRIM41Q8WV44 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC25.84■■□□□ 1.73
TRIM41Q8WV44 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC25.84■■□□□ 1.73
TRIM41Q8WV44 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
TRIM41Q8WV44 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
TRIM41Q8WV44 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
TRIM41Q8WV44 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC25.84■■□□□ 1.73
TRIM41Q8WV44 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
TRIM41Q8WV44 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
TRIM41Q8WV44 AL359258.3-201ENST00000622910 2331 ntBASIC25.83■■□□□ 1.73
TRIM41Q8WV44 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
TRIM41Q8WV44 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC25.83■■□□□ 1.73
TRIM41Q8WV44 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
TRIM41Q8WV44 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
TRIM41Q8WV44 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
TRIM41Q8WV44 CROCCP1-201ENST00000426910 5675 ntBASIC25.83■■□□□ 1.73
TRIM41Q8WV44 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
TRIM41Q8WV44 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
TRIM41Q8WV44 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
TRIM41Q8WV44 CRCP-204ENST00000398684 492 ntTSL 2 BASIC25.83■■□□□ 1.73
TRIM41Q8WV44 HLA-K-203ENST00000430151 1046 ntBASIC25.83■■□□□ 1.73
TRIM41Q8WV44 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC25.83■■□□□ 1.73
TRIM41Q8WV44 CEP164P1-201ENST00000455142 418 ntBASIC25.83■■□□□ 1.73
TRIM41Q8WV44 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC25.83■■□□□ 1.73
TRIM41Q8WV44 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC25.83■■□□□ 1.73
TRIM41Q8WV44 AC007663.3-201ENST00000609632 465 ntBASIC25.83■■□□□ 1.73
TRIM41Q8WV44 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
TRIM41Q8WV44 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
TRIM41Q8WV44 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
TRIM41Q8WV44 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.72
TRIM41Q8WV44 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
TRIM41Q8WV44 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC25.83■■□□□ 1.72
TRIM41Q8WV44 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
TRIM41Q8WV44 STRN-202ENST00000379213 2254 ntTSL 5 BASIC25.83■■□□□ 1.72
TRIM41Q8WV44 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC25.82■■□□□ 1.72
TRIM41Q8WV44 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC25.82■■□□□ 1.72
TRIM41Q8WV44 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
TRIM41Q8WV44 MST1L-201ENST00000442552 2185 ntBASIC25.82■■□□□ 1.72
TRIM41Q8WV44 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
TRIM41Q8WV44 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
TRIM41Q8WV44 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
TRIM41Q8WV44 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
TRIM41Q8WV44 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
TRIM41Q8WV44 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
TRIM41Q8WV44 SERPINA13P-202ENST00000478994 924 ntBASIC25.82■■□□□ 1.72
TRIM41Q8WV44 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC25.82■■□□□ 1.72
TRIM41Q8WV44 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC25.82■■□□□ 1.72
TRIM41Q8WV44 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC25.82■■□□□ 1.72
TRIM41Q8WV44 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC25.82■■□□□ 1.72
TRIM41Q8WV44 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
TRIM41Q8WV44 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC25.82■■□□□ 1.72
TRIM41Q8WV44 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
TRIM41Q8WV44 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
TRIM41Q8WV44 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC25.82■■□□□ 1.72
TRIM41Q8WV44 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC25.82■■□□□ 1.72
TRIM41Q8WV44 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
TRIM41Q8WV44 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
TRIM41Q8WV44 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
TRIM41Q8WV44 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
TRIM41Q8WV44 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC25.82■■□□□ 1.72
TRIM41Q8WV44 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC25.82■■□□□ 1.72
TRIM41Q8WV44 REXO1L5P-201ENST00000622260 2098 ntBASIC25.81■■□□□ 1.72
TRIM41Q8WV44 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
TRIM41Q8WV44 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
TRIM41Q8WV44 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
TRIM41Q8WV44 ZBTB45P1-201ENST00000452761 1456 ntBASIC25.81■■□□□ 1.72
TRIM41Q8WV44 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
TRIM41Q8WV44 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
TRIM41Q8WV44 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
TRIM41Q8WV44 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
TRIM41Q8WV44 B9D1-203ENST00000395615 805 ntTSL 3 BASIC25.81■■□□□ 1.72
TRIM41Q8WV44 LSM5-207ENST00000410044 687 ntTSL 3 BASIC25.81■■□□□ 1.72
TRIM41Q8WV44 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC25.81■■□□□ 1.72
TRIM41Q8WV44 EIF3FP3-201ENST00000434851 1086 ntBASIC25.81■■□□□ 1.72
TRIM41Q8WV44 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
TRIM41Q8WV44 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
TRIM41Q8WV44 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
TRIM41Q8WV44 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC25.81■■□□□ 1.72
TRIM41Q8WV44 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC25.81■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms