Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NEDD1Q8NHV4 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC17.57■□□□□ 0.4
NEDD1Q8NHV4 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC17.57■□□□□ 0.4
NEDD1Q8NHV4 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC17.57■□□□□ 0.4
NEDD1Q8NHV4 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
NEDD1Q8NHV4 AL008638.5-201ENST00000623814 1298 ntBASIC17.57■□□□□ 0.4
NEDD1Q8NHV4 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC17.57■□□□□ 0.4
NEDD1Q8NHV4 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
NEDD1Q8NHV4 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
NEDD1Q8NHV4 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC17.57■□□□□ 0.4
NEDD1Q8NHV4 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
NEDD1Q8NHV4 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
NEDD1Q8NHV4 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
NEDD1Q8NHV4 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
NEDD1Q8NHV4 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
NEDD1Q8NHV4 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC17.56■□□□□ 0.4
NEDD1Q8NHV4 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
NEDD1Q8NHV4 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NEDD1Q8NHV4 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
NEDD1Q8NHV4 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NEDD1Q8NHV4 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NEDD1Q8NHV4 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.56■□□□□ 0.4
NEDD1Q8NHV4 AC020907.1-201ENST00000616460 1350 ntBASIC17.56■□□□□ 0.4
NEDD1Q8NHV4 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
NEDD1Q8NHV4 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
NEDD1Q8NHV4 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NEDD1Q8NHV4 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NEDD1Q8NHV4 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NEDD1Q8NHV4 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NEDD1Q8NHV4 AC023157.3-201ENST00000619086 2088 ntBASIC17.56■□□□□ 0.4
NEDD1Q8NHV4 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
NEDD1Q8NHV4 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NEDD1Q8NHV4 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NEDD1Q8NHV4 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
NEDD1Q8NHV4 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NEDD1Q8NHV4 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NEDD1Q8NHV4 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
NEDD1Q8NHV4 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NEDD1Q8NHV4 AC006033.1-201ENST00000440505 426 ntBASIC17.56■□□□□ 0.4
NEDD1Q8NHV4 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC17.56■□□□□ 0.4
NEDD1Q8NHV4 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NEDD1Q8NHV4 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC17.56■□□□□ 0.4
NEDD1Q8NHV4 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC17.56■□□□□ 0.4
NEDD1Q8NHV4 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC17.56■□□□□ 0.4
NEDD1Q8NHV4 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC17.56■□□□□ 0.4
NEDD1Q8NHV4 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC17.56■□□□□ 0.4
NEDD1Q8NHV4 KLK11-210ENST00000600362 759 ntTSL 3 BASIC17.56■□□□□ 0.4
NEDD1Q8NHV4 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
NEDD1Q8NHV4 GPR182-203ENST00000622922 591 ntBASIC17.56■□□□□ 0.4
NEDD1Q8NHV4 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
NEDD1Q8NHV4 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NEDD1Q8NHV4 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NEDD1Q8NHV4 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC17.56■□□□□ 0.4
NEDD1Q8NHV4 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NEDD1Q8NHV4 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.56■□□□□ 0.4
NEDD1Q8NHV4 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NEDD1Q8NHV4 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC17.56■□□□□ 0.4
NEDD1Q8NHV4 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NEDD1Q8NHV4 AC018735.1-201ENST00000437208 1502 ntBASIC17.56■□□□□ 0.4
NEDD1Q8NHV4 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NEDD1Q8NHV4 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC17.56■□□□□ 0.4
NEDD1Q8NHV4 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NEDD1Q8NHV4 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NEDD1Q8NHV4 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NEDD1Q8NHV4 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NEDD1Q8NHV4 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NEDD1Q8NHV4 SALL4P5-201ENST00000419001 1760 ntBASIC17.56■□□□□ 0.4
NEDD1Q8NHV4 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
NEDD1Q8NHV4 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NEDD1Q8NHV4 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NEDD1Q8NHV4 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NEDD1Q8NHV4 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
NEDD1Q8NHV4 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NEDD1Q8NHV4 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NEDD1Q8NHV4 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NEDD1Q8NHV4 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NEDD1Q8NHV4 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC17.55■□□□□ 0.4
NEDD1Q8NHV4 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NEDD1Q8NHV4 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NEDD1Q8NHV4 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC17.55■□□□□ 0.4
NEDD1Q8NHV4 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NEDD1Q8NHV4 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NEDD1Q8NHV4 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC17.55■□□□□ 0.4
NEDD1Q8NHV4 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NEDD1Q8NHV4 AL354877.1-201ENST00000424412 413 ntBASIC17.55■□□□□ 0.4
NEDD1Q8NHV4 POM121L10P-201ENST00000436994 1285 ntBASIC17.55■□□□□ 0.4
NEDD1Q8NHV4 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NEDD1Q8NHV4 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NEDD1Q8NHV4 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
NEDD1Q8NHV4 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC17.55■□□□□ 0.4
NEDD1Q8NHV4 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC17.55■□□□□ 0.4
NEDD1Q8NHV4 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC17.55■□□□□ 0.4
NEDD1Q8NHV4 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NEDD1Q8NHV4 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.55■□□□□ 0.4
NEDD1Q8NHV4 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.55■□□□□ 0.4
NEDD1Q8NHV4 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NEDD1Q8NHV4 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.55■□□□□ 0.4
NEDD1Q8NHV4 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NEDD1Q8NHV4 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NEDD1Q8NHV4 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms