Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AC012441.1-201ENST00000446669 685 ntBASIC16.01■□□□□ 0.15
SCUBE3Q8IX30 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC16.01■□□□□ 0.15
SCUBE3Q8IX30 AC068587.3-201ENST00000526613 355 ntBASIC16.01■□□□□ 0.15
SCUBE3Q8IX30 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.01■□□□□ 0.15
SCUBE3Q8IX30 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC16.01■□□□□ 0.15
SCUBE3Q8IX30 RPS15-205ENST00000586686 562 ntTSL 5 BASIC16.01■□□□□ 0.15
SCUBE3Q8IX30 RPS15-208ENST00000591804 711 ntTSL 5 BASIC16.01■□□□□ 0.15
SCUBE3Q8IX30 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCUBE3Q8IX30 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCUBE3Q8IX30 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.01■□□□□ 0.15
SCUBE3Q8IX30 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SCUBE3Q8IX30 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCUBE3Q8IX30 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SCUBE3Q8IX30 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCUBE3Q8IX30 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCUBE3Q8IX30 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCUBE3Q8IX30 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCUBE3Q8IX30 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCUBE3Q8IX30 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SCUBE3Q8IX30 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCUBE3Q8IX30 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
SCUBE3Q8IX30 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCUBE3Q8IX30 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCUBE3Q8IX30 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
SCUBE3Q8IX30 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
SCUBE3Q8IX30 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
SCUBE3Q8IX30 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
SCUBE3Q8IX30 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SCUBE3Q8IX30 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
SCUBE3Q8IX30 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
SCUBE3Q8IX30 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16■□□□□ 0.15
SCUBE3Q8IX30 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SCUBE3Q8IX30 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC16■□□□□ 0.15
SCUBE3Q8IX30 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
SCUBE3Q8IX30 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
SCUBE3Q8IX30 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SCUBE3Q8IX30 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SCUBE3Q8IX30 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC16■□□□□ 0.15
SCUBE3Q8IX30 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SCUBE3Q8IX30 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
SCUBE3Q8IX30 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
SCUBE3Q8IX30 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16■□□□□ 0.15
SCUBE3Q8IX30 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
SCUBE3Q8IX30 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16■□□□□ 0.15
SCUBE3Q8IX30 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SCUBE3Q8IX30 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16■□□□□ 0.15
SCUBE3Q8IX30 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SCUBE3Q8IX30 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
SCUBE3Q8IX30 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
SCUBE3Q8IX30 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16■□□□□ 0.15
SCUBE3Q8IX30 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16■□□□□ 0.15
SCUBE3Q8IX30 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16■□□□□ 0.15
SCUBE3Q8IX30 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16■□□□□ 0.15
SCUBE3Q8IX30 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16■□□□□ 0.15
SCUBE3Q8IX30 AP001889.1-201ENST00000525414 633 ntBASIC16■□□□□ 0.15
SCUBE3Q8IX30 HILS1-202ENST00000545329 423 ntBASIC16■□□□□ 0.15
SCUBE3Q8IX30 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16■□□□□ 0.15
SCUBE3Q8IX30 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC16■□□□□ 0.15
SCUBE3Q8IX30 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16■□□□□ 0.15
SCUBE3Q8IX30 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
SCUBE3Q8IX30 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC16■□□□□ 0.15
SCUBE3Q8IX30 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC16■□□□□ 0.15
SCUBE3Q8IX30 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SCUBE3Q8IX30 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16■□□□□ 0.15
SCUBE3Q8IX30 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC16■□□□□ 0.15
SCUBE3Q8IX30 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC16■□□□□ 0.15
SCUBE3Q8IX30 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16■□□□□ 0.15
SCUBE3Q8IX30 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SCUBE3Q8IX30 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16■□□□□ 0.15
SCUBE3Q8IX30 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
SCUBE3Q8IX30 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16■□□□□ 0.15
SCUBE3Q8IX30 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16■□□□□ 0.15
SCUBE3Q8IX30 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
SCUBE3Q8IX30 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16■□□□□ 0.15
SCUBE3Q8IX30 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16■□□□□ 0.15
SCUBE3Q8IX30 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16■□□□□ 0.15
SCUBE3Q8IX30 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16■□□□□ 0.15
SCUBE3Q8IX30 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16■□□□□ 0.15
SCUBE3Q8IX30 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 LINC02228-204ENST00000642115 2962 ntBASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 LRRC59-203ENST00000576448 1531 ntBASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 KRT8P35-201ENST00000483942 1338 ntBASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
SCUBE3Q8IX30 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms