Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
NPAS4Q8IUM7 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 MBLAC2-202ENST00000514906 1936 ntBASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 AC253536.4-201ENST00000440539 267 ntBASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 ALG3P1-201ENST00000508806 1114 ntBASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 RTN3P1-201ENST00000536295 711 ntBASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 PAM16-211ENST00000575848 518 ntTSL 3 BASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 AC012044.1-201ENST00000603431 297 ntBASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 Z98259.2-201ENST00000641583 609 ntBASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 AMT-204ENST00000427987 1646 ntTSL 5 BASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 FAM90A7P-201ENST00000382628 1395 ntBASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 FAM90A23P-201ENST00000400136 1395 ntBASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 LILRP1-201ENST00000444199 1370 ntBASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 AC084018.2-201ENST00000613093 2607 ntBASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.11■□□□□ 0.17
NPAS4Q8IUM7 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 SKA2-202ENST00000437036 625 ntTSL 2 BASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 CEP164P1-201ENST00000455142 418 ntBASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 LDHBP1-201ENST00000455730 1119 ntBASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 SCARNA21-201ENST00000517026 139 ntBASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 FADS2-212ENST00000522639 360 ntTSL 5 BASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 CFL1-214ENST00000534769 758 ntTSL 2 BASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 AC242376.1-201ENST00000559033 726 ntBASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 FADS2-215ENST00000574708 385 ntTSL 3 BASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 MIR5572-201ENST00000583188 137 ntBASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 IRF3-215ENST00000596822 823 ntTSL 3 BASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 MIR6720-201ENST00000611664 98 ntBASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.1■□□□□ 0.17
NPAS4Q8IUM7 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms