Protein–RNA interactions for Protein: Q86XS8

RNF130, E3 ubiquitin-protein ligase RNF130, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF130Q86XS8 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.36□□□□□ -0.11
RNF130Q86XS8 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.36□□□□□ -0.11
RNF130Q86XS8 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
RNF130Q86XS8 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF130Q86XS8 LILRP1-201ENST00000444199 1370 ntBASIC14.36□□□□□ -0.11
RNF130Q86XS8 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.36□□□□□ -0.11
RNF130Q86XS8 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RNF130Q86XS8 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF130Q86XS8 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF130Q86XS8 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC14.36□□□□□ -0.11
RNF130Q86XS8 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.36□□□□□ -0.11
RNF130Q86XS8 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF130Q86XS8 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF130Q86XS8 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.36□□□□□ -0.11
RNF130Q86XS8 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF130Q86XS8 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF130Q86XS8 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RNF130Q86XS8 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.36□□□□□ -0.11
RNF130Q86XS8 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF130Q86XS8 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF130Q86XS8 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.36□□□□□ -0.11
RNF130Q86XS8 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RNF130Q86XS8 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF130Q86XS8 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.36□□□□□ -0.11
RNF130Q86XS8 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.36□□□□□ -0.11
RNF130Q86XS8 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.36□□□□□ -0.11
RNF130Q86XS8 MIR943-201ENST00000401286 94 ntBASIC14.36□□□□□ -0.11
RNF130Q86XS8 AC114501.2-201ENST00000439631 535 ntBASIC14.36□□□□□ -0.11
RNF130Q86XS8 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.36□□□□□ -0.11
RNF130Q86XS8 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.36□□□□□ -0.11
RNF130Q86XS8 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.36□□□□□ -0.11
RNF130Q86XS8 IGHV3-42-201ENST00000520410 361 ntBASIC14.36□□□□□ -0.11
RNF130Q86XS8 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RNF130Q86XS8 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.36□□□□□ -0.11
RNF130Q86XS8 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.36□□□□□ -0.11
RNF130Q86XS8 GPX4-206ENST00000588919 803 ntTSL 2 BASIC14.36□□□□□ -0.11
RNF130Q86XS8 AP001160.2-201ENST00000596071 487 ntBASIC14.36□□□□□ -0.11
RNF130Q86XS8 AL158212.4-201ENST00000624062 1286 ntBASIC14.36□□□□□ -0.11
RNF130Q86XS8 AC018442.1-201ENST00000421439 2061 ntBASIC14.36□□□□□ -0.11
RNF130Q86XS8 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RNF130Q86XS8 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
RNF130Q86XS8 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF130Q86XS8 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.36□□□□□ -0.11
RNF130Q86XS8 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF130Q86XS8 AC007326.2-201ENST00000624224 7579 ntBASIC14.36□□□□□ -0.11
RNF130Q86XS8 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC14.36□□□□□ -0.11
RNF130Q86XS8 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.36□□□□□ -0.11
RNF130Q86XS8 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF130Q86XS8 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.36□□□□□ -0.11
RNF130Q86XS8 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.36□□□□□ -0.11
RNF130Q86XS8 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF130Q86XS8 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
RNF130Q86XS8 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF130Q86XS8 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RNF130Q86XS8 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
RNF130Q86XS8 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.36□□□□□ -0.11
RNF130Q86XS8 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
RNF130Q86XS8 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.36□□□□□ -0.11
RNF130Q86XS8 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.36□□□□□ -0.11
RNF130Q86XS8 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
RNF130Q86XS8 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
RNF130Q86XS8 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF130Q86XS8 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RNF130Q86XS8 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.35□□□□□ -0.11
RNF130Q86XS8 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.35□□□□□ -0.11
RNF130Q86XS8 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.35□□□□□ -0.11
RNF130Q86XS8 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.35□□□□□ -0.11
RNF130Q86XS8 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RNF130Q86XS8 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RNF130Q86XS8 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.35□□□□□ -0.11
RNF130Q86XS8 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF130Q86XS8 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RNF130Q86XS8 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF130Q86XS8 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RNF130Q86XS8 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
RNF130Q86XS8 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RNF130Q86XS8 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF130Q86XS8 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RNF130Q86XS8 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
RNF130Q86XS8 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF130Q86XS8 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RNF130Q86XS8 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.35□□□□□ -0.11
RNF130Q86XS8 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.35□□□□□ -0.11
RNF130Q86XS8 TSSK5P-201ENST00000423978 907 ntBASIC14.35□□□□□ -0.11
RNF130Q86XS8 AC241585.1-201ENST00000433527 519 ntBASIC14.35□□□□□ -0.11
RNF130Q86XS8 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF130Q86XS8 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.35□□□□□ -0.11
RNF130Q86XS8 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.35□□□□□ -0.11
RNF130Q86XS8 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
RNF130Q86XS8 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.35□□□□□ -0.11
RNF130Q86XS8 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RNF130Q86XS8 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.35□□□□□ -0.11
RNF130Q86XS8 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RNF130Q86XS8 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF130Q86XS8 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.35□□□□□ -0.11
RNF130Q86XS8 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.35□□□□□ -0.11
RNF130Q86XS8 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RNF130Q86XS8 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC14.35□□□□□ -0.11
RNF130Q86XS8 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RNF130Q86XS8 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms