Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRRTM1Q86UE6 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRRTM1Q86UE6 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 AL122018.1-201ENST00000446607 2310 ntBASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 AC011474.4-201ENST00000623523 2076 ntBASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 FAM58DP-201ENST00000428076 619 ntBASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 KRT126P-201ENST00000549467 1181 ntBASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 AC007967.4-201ENST00000614700 386 ntBASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 AF228730.6-201ENST00000641497 218 ntBASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 AC084121.3-201ENST00000641716 218 ntBASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 AC126335.2-201ENST00000623362 4637 ntBASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
LRRTM1Q86UE6 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
LRRTM1Q86UE6 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.24□□□□□ -0.29
LRRTM1Q86UE6 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRRTM1Q86UE6 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LRRTM1Q86UE6 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
LRRTM1Q86UE6 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRRTM1Q86UE6 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.24□□□□□ -0.29
LRRTM1Q86UE6 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
LRRTM1Q86UE6 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
LRRTM1Q86UE6 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.24□□□□□ -0.29
LRRTM1Q86UE6 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRRTM1Q86UE6 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRRTM1Q86UE6 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRRTM1Q86UE6 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LRRTM1Q86UE6 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.24□□□□□ -0.29
LRRTM1Q86UE6 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRRTM1Q86UE6 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.24□□□□□ -0.29
LRRTM1Q86UE6 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.24□□□□□ -0.29
LRRTM1Q86UE6 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRRTM1Q86UE6 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
LRRTM1Q86UE6 AC015922.1-201ENST00000421102 1152 ntBASIC13.24□□□□□ -0.29
LRRTM1Q86UE6 RPL13P2-201ENST00000440687 659 ntBASIC13.24□□□□□ -0.29
LRRTM1Q86UE6 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.24□□□□□ -0.29
LRRTM1Q86UE6 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
LRRTM1Q86UE6 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC13.24□□□□□ -0.29
LRRTM1Q86UE6 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRRTM1Q86UE6 TSFM-210ENST00000550559 897 ntTSL 5 BASIC13.24□□□□□ -0.29
LRRTM1Q86UE6 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.24□□□□□ -0.29
LRRTM1Q86UE6 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC13.24□□□□□ -0.29
LRRTM1Q86UE6 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC13.24□□□□□ -0.29
LRRTM1Q86UE6 C20orf181-201ENST00000623918 480 ntBASIC13.24□□□□□ -0.29
LRRTM1Q86UE6 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LRRTM1Q86UE6 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.24□□□□□ -0.29
LRRTM1Q86UE6 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRRTM1Q86UE6 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRRTM1Q86UE6 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
LRRTM1Q86UE6 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRRTM1Q86UE6 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
LRRTM1Q86UE6 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms