Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 HLA-K-203ENST00000430151 1046 ntBASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 GIMAP3P-201ENST00000495150 836 ntBASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 TDH-203ENST00000531764 1110 ntBASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 PRSS30P-206ENST00000641773 873 ntBASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 AL360270.3-201ENST00000609118 1348 ntBASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
LYSMD3Q7Z3D4 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LYSMD3Q7Z3D4 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.3■□□□□ 0.04
LYSMD3Q7Z3D4 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LYSMD3Q7Z3D4 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LYSMD3Q7Z3D4 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LYSMD3Q7Z3D4 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LYSMD3Q7Z3D4 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LYSMD3Q7Z3D4 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LYSMD3Q7Z3D4 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LYSMD3Q7Z3D4 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LYSMD3Q7Z3D4 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
LYSMD3Q7Z3D4 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LYSMD3Q7Z3D4 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LYSMD3Q7Z3D4 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
LYSMD3Q7Z3D4 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.3■□□□□ 0.04
LYSMD3Q7Z3D4 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.3■□□□□ 0.04
LYSMD3Q7Z3D4 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
LYSMD3Q7Z3D4 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
LYSMD3Q7Z3D4 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.3■□□□□ 0.04
LYSMD3Q7Z3D4 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LYSMD3Q7Z3D4 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC15.3■□□□□ 0.04
LYSMD3Q7Z3D4 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LYSMD3Q7Z3D4 ACTG1P3-201ENST00000431775 1114 ntBASIC15.3■□□□□ 0.04
LYSMD3Q7Z3D4 TTTY23B-201ENST00000442790 549 ntBASIC15.3■□□□□ 0.04
LYSMD3Q7Z3D4 AC007389.4-201ENST00000454674 793 ntBASIC15.3■□□□□ 0.04
LYSMD3Q7Z3D4 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
LYSMD3Q7Z3D4 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LYSMD3Q7Z3D4 AC009486.1-201ENST00000569860 813 ntBASIC15.3■□□□□ 0.04
LYSMD3Q7Z3D4 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.3■□□□□ 0.04
LYSMD3Q7Z3D4 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.3■□□□□ 0.04
LYSMD3Q7Z3D4 AL359881.2-201ENST00000602973 570 ntBASIC15.3■□□□□ 0.04
LYSMD3Q7Z3D4 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LYSMD3Q7Z3D4 AP005019.2-201ENST00000615104 511 ntBASIC15.3■□□□□ 0.04
LYSMD3Q7Z3D4 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LYSMD3Q7Z3D4 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
LYSMD3Q7Z3D4 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.3■□□□□ 0.04
LYSMD3Q7Z3D4 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LYSMD3Q7Z3D4 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LYSMD3Q7Z3D4 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LYSMD3Q7Z3D4 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LYSMD3Q7Z3D4 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LYSMD3Q7Z3D4 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LYSMD3Q7Z3D4 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LYSMD3Q7Z3D4 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LYSMD3Q7Z3D4 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LYSMD3Q7Z3D4 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LYSMD3Q7Z3D4 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LYSMD3Q7Z3D4 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LYSMD3Q7Z3D4 LINC00528-201ENST00000600723 2160 ntBASIC15.29■□□□□ 0.04
LYSMD3Q7Z3D4 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.29■□□□□ 0.04
LYSMD3Q7Z3D4 ZBED1P1-201ENST00000502364 1930 ntBASIC15.29■□□□□ 0.04
LYSMD3Q7Z3D4 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LYSMD3Q7Z3D4 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.29■□□□□ 0.04
LYSMD3Q7Z3D4 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.29■□□□□ 0.04
LYSMD3Q7Z3D4 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LYSMD3Q7Z3D4 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LYSMD3Q7Z3D4 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LYSMD3Q7Z3D4 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LYSMD3Q7Z3D4 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LYSMD3Q7Z3D4 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms