Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC15.97■□□□□ 0.15
FOXR1Q6PIV2 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
FOXR1Q6PIV2 CICP11-201ENST00000434745 2827 ntBASIC15.97■□□□□ 0.15
FOXR1Q6PIV2 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
FOXR1Q6PIV2 C2-206ENST00000442278 2434 ntTSL 2 BASIC15.97■□□□□ 0.15
FOXR1Q6PIV2 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FOXR1Q6PIV2 AC152010.1-201ENST00000415779 2006 ntBASIC15.97■□□□□ 0.15
FOXR1Q6PIV2 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
FOXR1Q6PIV2 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
FOXR1Q6PIV2 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.97■□□□□ 0.15
FOXR1Q6PIV2 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
FOXR1Q6PIV2 MAPT-IT1-201ENST00000624111 3016 ntBASIC15.97■□□□□ 0.15
FOXR1Q6PIV2 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
FOXR1Q6PIV2 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
FOXR1Q6PIV2 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.97■□□□□ 0.15
FOXR1Q6PIV2 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
FOXR1Q6PIV2 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.96■□□□□ 0.15
FOXR1Q6PIV2 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
FOXR1Q6PIV2 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
FOXR1Q6PIV2 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
FOXR1Q6PIV2 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
FOXR1Q6PIV2 AL118506.1-201ENST00000601296 3082 ntBASIC15.96■□□□□ 0.15
FOXR1Q6PIV2 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
FOXR1Q6PIV2 AC011477.6-201ENST00000604980 1927 ntBASIC15.96■□□□□ 0.15
FOXR1Q6PIV2 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
FOXR1Q6PIV2 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.96■□□□□ 0.15
FOXR1Q6PIV2 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
FOXR1Q6PIV2 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
FOXR1Q6PIV2 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
FOXR1Q6PIV2 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
FOXR1Q6PIV2 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
FOXR1Q6PIV2 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.96■□□□□ 0.15
FOXR1Q6PIV2 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
FOXR1Q6PIV2 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
FOXR1Q6PIV2 GAPDHP21-201ENST00000450301 1010 ntBASIC15.96■□□□□ 0.15
FOXR1Q6PIV2 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.96■□□□□ 0.15
FOXR1Q6PIV2 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.96■□□□□ 0.15
FOXR1Q6PIV2 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.96■□□□□ 0.15
FOXR1Q6PIV2 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.96■□□□□ 0.15
FOXR1Q6PIV2 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.96■□□□□ 0.15
FOXR1Q6PIV2 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.96■□□□□ 0.15
FOXR1Q6PIV2 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
FOXR1Q6PIV2 AL008721.1-201ENST00000609964 604 ntBASIC15.96■□□□□ 0.15
FOXR1Q6PIV2 AC073592.8-201ENST00000624126 511 ntBASIC15.96■□□□□ 0.15
FOXR1Q6PIV2 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.96■□□□□ 0.15
FOXR1Q6PIV2 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15.96■□□□□ 0.15
FOXR1Q6PIV2 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
FOXR1Q6PIV2 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
FOXR1Q6PIV2 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
FOXR1Q6PIV2 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
FOXR1Q6PIV2 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC15.96■□□□□ 0.15
FOXR1Q6PIV2 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
FOXR1Q6PIV2 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.14
FOXR1Q6PIV2 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.14
FOXR1Q6PIV2 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC15.96■□□□□ 0.14
FOXR1Q6PIV2 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
FOXR1Q6PIV2 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
FOXR1Q6PIV2 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.96■□□□□ 0.14
FOXR1Q6PIV2 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.96■□□□□ 0.14
FOXR1Q6PIV2 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC15.96■□□□□ 0.14
FOXR1Q6PIV2 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC15.96■□□□□ 0.14
FOXR1Q6PIV2 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
FOXR1Q6PIV2 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
FOXR1Q6PIV2 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
FOXR1Q6PIV2 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.95■□□□□ 0.14
FOXR1Q6PIV2 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
FOXR1Q6PIV2 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
FOXR1Q6PIV2 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
FOXR1Q6PIV2 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
FOXR1Q6PIV2 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
FOXR1Q6PIV2 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
FOXR1Q6PIV2 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
FOXR1Q6PIV2 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
FOXR1Q6PIV2 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC15.95■□□□□ 0.14
FOXR1Q6PIV2 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
FOXR1Q6PIV2 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
FOXR1Q6PIV2 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC15.95■□□□□ 0.14
FOXR1Q6PIV2 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
FOXR1Q6PIV2 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
FOXR1Q6PIV2 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
FOXR1Q6PIV2 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
FOXR1Q6PIV2 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
FOXR1Q6PIV2 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
FOXR1Q6PIV2 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.95■□□□□ 0.14
FOXR1Q6PIV2 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.95■□□□□ 0.14
FOXR1Q6PIV2 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.95■□□□□ 0.14
FOXR1Q6PIV2 CRB3P1-201ENST00000449338 276 ntBASIC15.95■□□□□ 0.14
FOXR1Q6PIV2 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
FOXR1Q6PIV2 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
FOXR1Q6PIV2 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
FOXR1Q6PIV2 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
FOXR1Q6PIV2 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.95■□□□□ 0.14
FOXR1Q6PIV2 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC15.95■□□□□ 0.14
FOXR1Q6PIV2 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
FOXR1Q6PIV2 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
FOXR1Q6PIV2 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
FOXR1Q6PIV2 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
FOXR1Q6PIV2 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
FOXR1Q6PIV2 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
FOXR1Q6PIV2 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms