Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 AC025678.2-201ENST00000562061 970 ntBASIC13.4□□□□□ -0.26
C11orf88Q6PI97 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC13.4□□□□□ -0.26
C11orf88Q6PI97 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC13.4□□□□□ -0.26
C11orf88Q6PI97 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13.4□□□□□ -0.26
C11orf88Q6PI97 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.4□□□□□ -0.26
C11orf88Q6PI97 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.4□□□□□ -0.26
C11orf88Q6PI97 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
C11orf88Q6PI97 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
C11orf88Q6PI97 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC13.4□□□□□ -0.26
C11orf88Q6PI97 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
C11orf88Q6PI97 KRT8P44-201ENST00000441609 1350 ntBASIC13.4□□□□□ -0.26
C11orf88Q6PI97 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.4□□□□□ -0.26
C11orf88Q6PI97 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.4□□□□□ -0.26
C11orf88Q6PI97 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
C11orf88Q6PI97 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
C11orf88Q6PI97 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
C11orf88Q6PI97 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.4□□□□□ -0.26
C11orf88Q6PI97 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.4□□□□□ -0.26
C11orf88Q6PI97 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
C11orf88Q6PI97 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
C11orf88Q6PI97 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
C11orf88Q6PI97 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.27
C11orf88Q6PI97 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
C11orf88Q6PI97 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
C11orf88Q6PI97 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
C11orf88Q6PI97 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
C11orf88Q6PI97 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
C11orf88Q6PI97 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
C11orf88Q6PI97 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
C11orf88Q6PI97 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
C11orf88Q6PI97 AC012569.1-201ENST00000591191 1524 ntBASIC13.39□□□□□ -0.27
C11orf88Q6PI97 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
C11orf88Q6PI97 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC13.39□□□□□ -0.27
C11orf88Q6PI97 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
C11orf88Q6PI97 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
C11orf88Q6PI97 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
C11orf88Q6PI97 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
C11orf88Q6PI97 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
C11orf88Q6PI97 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
C11orf88Q6PI97 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
C11orf88Q6PI97 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
C11orf88Q6PI97 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC13.39□□□□□ -0.27
C11orf88Q6PI97 AL161645.1-201ENST00000622716 1255 ntBASIC13.39□□□□□ -0.27
C11orf88Q6PI97 AC092902.6-201ENST00000641783 218 ntBASIC13.39□□□□□ -0.27
C11orf88Q6PI97 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.39□□□□□ -0.27
C11orf88Q6PI97 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
C11orf88Q6PI97 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
C11orf88Q6PI97 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
C11orf88Q6PI97 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.39□□□□□ -0.27
C11orf88Q6PI97 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
C11orf88Q6PI97 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
C11orf88Q6PI97 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.39□□□□□ -0.27
C11orf88Q6PI97 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
C11orf88Q6PI97 AC004899.2-201ENST00000622993 3860 ntBASIC13.39□□□□□ -0.27
C11orf88Q6PI97 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
C11orf88Q6PI97 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.39□□□□□ -0.27
C11orf88Q6PI97 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
C11orf88Q6PI97 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.39□□□□□ -0.27
C11orf88Q6PI97 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
C11orf88Q6PI97 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
C11orf88Q6PI97 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
C11orf88Q6PI97 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
C11orf88Q6PI97 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
C11orf88Q6PI97 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
C11orf88Q6PI97 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
C11orf88Q6PI97 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
C11orf88Q6PI97 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
C11orf88Q6PI97 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
C11orf88Q6PI97 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.39□□□□□ -0.27
C11orf88Q6PI97 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
C11orf88Q6PI97 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
C11orf88Q6PI97 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
C11orf88Q6PI97 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.38□□□□□ -0.27
C11orf88Q6PI97 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
C11orf88Q6PI97 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.38□□□□□ -0.27
C11orf88Q6PI97 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
C11orf88Q6PI97 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
C11orf88Q6PI97 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC13.38□□□□□ -0.27
C11orf88Q6PI97 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
C11orf88Q6PI97 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
C11orf88Q6PI97 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.38□□□□□ -0.27
C11orf88Q6PI97 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.38□□□□□ -0.27
C11orf88Q6PI97 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.38□□□□□ -0.27
C11orf88Q6PI97 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.38□□□□□ -0.27
C11orf88Q6PI97 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
C11orf88Q6PI97 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
C11orf88Q6PI97 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
C11orf88Q6PI97 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
C11orf88Q6PI97 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
C11orf88Q6PI97 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
C11orf88Q6PI97 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC13.38□□□□□ -0.27
C11orf88Q6PI97 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC13.38□□□□□ -0.27
C11orf88Q6PI97 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC13.38□□□□□ -0.27
C11orf88Q6PI97 AC140658.5-201ENST00000438532 169 ntBASIC13.38□□□□□ -0.27
C11orf88Q6PI97 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.38□□□□□ -0.27
C11orf88Q6PI97 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.38□□□□□ -0.27
C11orf88Q6PI97 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.38□□□□□ -0.27
C11orf88Q6PI97 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
C11orf88Q6PI97 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC13.38□□□□□ -0.27
C11orf88Q6PI97 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms