Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC62Q6P9F0 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC62Q6P9F0 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC62Q6P9F0 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC62Q6P9F0 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC62Q6P9F0 AC067930.6-201ENST00000623257 4947 ntBASIC17.06■□□□□ 0.32
CCDC62Q6P9F0 KRT8P4-201ENST00000509735 1454 ntBASIC17.05■□□□□ 0.32
CCDC62Q6P9F0 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.05■□□□□ 0.32
CCDC62Q6P9F0 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC62Q6P9F0 AC092850.2-201ENST00000623821 2697 ntBASIC17.05■□□□□ 0.32
CCDC62Q6P9F0 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC62Q6P9F0 SLC9A7P1-202ENST00000556476 2239 ntBASIC17.05■□□□□ 0.32
CCDC62Q6P9F0 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC62Q6P9F0 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC62Q6P9F0 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC62Q6P9F0 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC62Q6P9F0 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC17.05■□□□□ 0.32
CCDC62Q6P9F0 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.05■□□□□ 0.32
CCDC62Q6P9F0 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.05■□□□□ 0.32
CCDC62Q6P9F0 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC62Q6P9F0 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC62Q6P9F0 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC62Q6P9F0 SMS-201ENST00000379404 1174 ntTSL 3 BASIC17.05■□□□□ 0.32
CCDC62Q6P9F0 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CCDC62Q6P9F0 HNRNPA1P32-201ENST00000396326 963 ntBASIC17.05■□□□□ 0.32
CCDC62Q6P9F0 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC17.05■□□□□ 0.32
CCDC62Q6P9F0 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
CCDC62Q6P9F0 HIST2H2BB-201ENST00000449108 381 ntBASIC17.05■□□□□ 0.32
CCDC62Q6P9F0 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC17.05■□□□□ 0.32
CCDC62Q6P9F0 AC126915.1-201ENST00000522847 1038 ntBASIC17.05■□□□□ 0.32
CCDC62Q6P9F0 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC62Q6P9F0 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.05■□□□□ 0.32
CCDC62Q6P9F0 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC62Q6P9F0 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC62Q6P9F0 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC62Q6P9F0 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CCDC62Q6P9F0 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CCDC62Q6P9F0 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC62Q6P9F0 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.05■□□□□ 0.32
CCDC62Q6P9F0 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC62Q6P9F0 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC62Q6P9F0 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC62Q6P9F0 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC62Q6P9F0 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC62Q6P9F0 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC62Q6P9F0 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC62Q6P9F0 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC62Q6P9F0 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC62Q6P9F0 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC62Q6P9F0 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC62Q6P9F0 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC62Q6P9F0 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC62Q6P9F0 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC62Q6P9F0 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC62Q6P9F0 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.04■□□□□ 0.32
CCDC62Q6P9F0 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CCDC62Q6P9F0 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC62Q6P9F0 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC62Q6P9F0 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CCDC62Q6P9F0 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC17.04■□□□□ 0.32
CCDC62Q6P9F0 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC62Q6P9F0 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC62Q6P9F0 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC62Q6P9F0 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC62Q6P9F0 AC100850.1-201ENST00000506768 649 ntBASIC17.04■□□□□ 0.32
CCDC62Q6P9F0 SCARNA20.5-201ENST00000516991 142 ntBASIC17.04■□□□□ 0.32
CCDC62Q6P9F0 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC62Q6P9F0 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC62Q6P9F0 AP001002.3-201ENST00000623482 206 ntBASIC17.04■□□□□ 0.32
CCDC62Q6P9F0 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC62Q6P9F0 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC62Q6P9F0 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CCDC62Q6P9F0 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC62Q6P9F0 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC62Q6P9F0 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC62Q6P9F0 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC62Q6P9F0 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CCDC62Q6P9F0 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC62Q6P9F0 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC62Q6P9F0 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC62Q6P9F0 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC62Q6P9F0 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC62Q6P9F0 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC62Q6P9F0 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC62Q6P9F0 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC62Q6P9F0 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.03■□□□□ 0.32
CCDC62Q6P9F0 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC62Q6P9F0 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC62Q6P9F0 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC62Q6P9F0 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CCDC62Q6P9F0 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC62Q6P9F0 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC62Q6P9F0 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC62Q6P9F0 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC62Q6P9F0 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC62Q6P9F0 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC62Q6P9F0 HNRNPA1P63-201ENST00000427917 963 ntBASIC17.03■□□□□ 0.32
CCDC62Q6P9F0 FNTAP2-201ENST00000430308 634 ntBASIC17.03■□□□□ 0.32
CCDC62Q6P9F0 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC17.03■□□□□ 0.32
CCDC62Q6P9F0 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms