Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LPCAT4Q643R3 AC090505.1-201ENST00000430515 1834 ntBASIC14.38□□□□□ -0.11
LPCAT4Q643R3 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 MIR497HG-202ENST00000572453 3838 ntBASIC14.38□□□□□ -0.11
LPCAT4Q643R3 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 EEF1DP4-201ENST00000446006 880 ntBASIC14.38□□□□□ -0.11
LPCAT4Q643R3 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 AC098859.1-201ENST00000502915 1238 ntBASIC14.38□□□□□ -0.11
LPCAT4Q643R3 KRT18P35-201ENST00000510488 1269 ntBASIC14.38□□□□□ -0.11
LPCAT4Q643R3 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC14.38□□□□□ -0.11
LPCAT4Q643R3 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
LPCAT4Q643R3 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
LPCAT4Q643R3 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
LPCAT4Q643R3 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LPCAT4Q643R3 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LPCAT4Q643R3 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC14.37□□□□□ -0.11
LPCAT4Q643R3 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.37□□□□□ -0.11
LPCAT4Q643R3 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
LPCAT4Q643R3 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC14.37□□□□□ -0.11
LPCAT4Q643R3 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LPCAT4Q643R3 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
LPCAT4Q643R3 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
LPCAT4Q643R3 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
LPCAT4Q643R3 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
LPCAT4Q643R3 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
LPCAT4Q643R3 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LPCAT4Q643R3 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
LPCAT4Q643R3 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC14.37□□□□□ -0.11
LPCAT4Q643R3 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
LPCAT4Q643R3 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
LPCAT4Q643R3 AC136604.1-201ENST00000418535 575 ntBASIC14.37□□□□□ -0.11
LPCAT4Q643R3 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC14.37□□□□□ -0.11
LPCAT4Q643R3 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.37□□□□□ -0.11
LPCAT4Q643R3 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.37□□□□□ -0.11
LPCAT4Q643R3 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.37□□□□□ -0.11
LPCAT4Q643R3 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC14.37□□□□□ -0.11
LPCAT4Q643R3 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.37□□□□□ -0.11
LPCAT4Q643R3 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 583 ms