Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 BSG-215ENST00000618006 1329 ntTSL 2 BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 PP14571-201ENST00000404327 934 ntTSL 2 BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 HNRNPUP1-201ENST00000554987 333 ntBASIC12.17□□□□□ -0.46
FAM78BQ5VT40 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 AP002472.1-201ENST00000577490 586 ntBASIC12.17□□□□□ -0.46
FAM78BQ5VT40 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
FAM78BQ5VT40 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
FAM78BQ5VT40 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
FAM78BQ5VT40 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
FAM78BQ5VT40 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
FAM78BQ5VT40 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
FAM78BQ5VT40 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
FAM78BQ5VT40 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.16□□□□□ -0.46
FAM78BQ5VT40 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
FAM78BQ5VT40 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC12.16□□□□□ -0.46
FAM78BQ5VT40 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
FAM78BQ5VT40 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
FAM78BQ5VT40 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
FAM78BQ5VT40 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
FAM78BQ5VT40 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12.16□□□□□ -0.46
FAM78BQ5VT40 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
FAM78BQ5VT40 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
FAM78BQ5VT40 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
FAM78BQ5VT40 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
FAM78BQ5VT40 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
FAM78BQ5VT40 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
FAM78BQ5VT40 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
FAM78BQ5VT40 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC12.16□□□□□ -0.46
FAM78BQ5VT40 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC12.16□□□□□ -0.46
FAM78BQ5VT40 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
FAM78BQ5VT40 AC023274.1-201ENST00000418278 595 ntBASIC12.16□□□□□ -0.46
FAM78BQ5VT40 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC12.16□□□□□ -0.46
FAM78BQ5VT40 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC12.16□□□□□ -0.46
FAM78BQ5VT40 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC12.16□□□□□ -0.46
FAM78BQ5VT40 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC12.16□□□□□ -0.46
FAM78BQ5VT40 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC12.16□□□□□ -0.46
FAM78BQ5VT40 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC12.16□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms