Protein–RNA interactions for Protein: Q5VT28

FAM27B, Protein FAM27A/B/C, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM27BQ5VT28 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
FAM27BQ5VT28 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FAM27BQ5VT28 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
FAM27BQ5VT28 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
FAM27BQ5VT28 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.31□□□□□ -0.28
FAM27BQ5VT28 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
FAM27BQ5VT28 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
FAM27BQ5VT28 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
FAM27BQ5VT28 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.31□□□□□ -0.28
FAM27BQ5VT28 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
FAM27BQ5VT28 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
FAM27BQ5VT28 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.3□□□□□ -0.28
FAM27BQ5VT28 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
FAM27BQ5VT28 AC011270.2-201ENST00000624293 2550 ntBASIC13.3□□□□□ -0.28
FAM27BQ5VT28 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
FAM27BQ5VT28 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FAM27BQ5VT28 USE1-206ENST00000595101 1776 ntTSL 2 BASIC13.3□□□□□ -0.28
FAM27BQ5VT28 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FAM27BQ5VT28 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FAM27BQ5VT28 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
FAM27BQ5VT28 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
FAM27BQ5VT28 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
FAM27BQ5VT28 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FAM27BQ5VT28 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FAM27BQ5VT28 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
FAM27BQ5VT28 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
FAM27BQ5VT28 AC098614.1-201ENST00000368528 745 ntBASIC13.3□□□□□ -0.28
FAM27BQ5VT28 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.3□□□□□ -0.28
FAM27BQ5VT28 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FAM27BQ5VT28 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.3□□□□□ -0.28
FAM27BQ5VT28 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
FAM27BQ5VT28 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.3□□□□□ -0.28
FAM27BQ5VT28 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
FAM27BQ5VT28 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
FAM27BQ5VT28 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
FAM27BQ5VT28 AC022137.2-201ENST00000503482 481 ntBASIC13.3□□□□□ -0.28
FAM27BQ5VT28 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.3□□□□□ -0.28
FAM27BQ5VT28 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.3□□□□□ -0.28
FAM27BQ5VT28 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.3□□□□□ -0.28
FAM27BQ5VT28 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FAM27BQ5VT28 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
FAM27BQ5VT28 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
FAM27BQ5VT28 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC13.3□□□□□ -0.28
FAM27BQ5VT28 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
FAM27BQ5VT28 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
FAM27BQ5VT28 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
FAM27BQ5VT28 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
FAM27BQ5VT28 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FAM27BQ5VT28 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FAM27BQ5VT28 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC13.3□□□□□ -0.28
FAM27BQ5VT28 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FAM27BQ5VT28 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.3□□□□□ -0.28
FAM27BQ5VT28 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.3□□□□□ -0.28
FAM27BQ5VT28 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
FAM27BQ5VT28 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
FAM27BQ5VT28 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FAM27BQ5VT28 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
FAM27BQ5VT28 AC023090.2-201ENST00000625182 2110 ntBASIC13.3□□□□□ -0.28
FAM27BQ5VT28 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.3□□□□□ -0.28
FAM27BQ5VT28 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.3□□□□□ -0.28
FAM27BQ5VT28 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.29□□□□□ -0.28
FAM27BQ5VT28 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
FAM27BQ5VT28 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.29□□□□□ -0.28
FAM27BQ5VT28 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
FAM27BQ5VT28 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.29□□□□□ -0.28
FAM27BQ5VT28 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FAM27BQ5VT28 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
FAM27BQ5VT28 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FAM27BQ5VT28 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FAM27BQ5VT28 LRRC59-203ENST00000576448 1531 ntBASIC13.29□□□□□ -0.28
FAM27BQ5VT28 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.29□□□□□ -0.28
FAM27BQ5VT28 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.29□□□□□ -0.28
FAM27BQ5VT28 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
FAM27BQ5VT28 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FAM27BQ5VT28 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.29□□□□□ -0.28
FAM27BQ5VT28 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FAM27BQ5VT28 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
FAM27BQ5VT28 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.29□□□□□ -0.28
FAM27BQ5VT28 AC106881.1-201ENST00000605849 3329 ntBASIC13.29□□□□□ -0.28
FAM27BQ5VT28 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
FAM27BQ5VT28 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FAM27BQ5VT28 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.29□□□□□ -0.28
FAM27BQ5VT28 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
FAM27BQ5VT28 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC13.29□□□□□ -0.28
FAM27BQ5VT28 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FAM27BQ5VT28 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
FAM27BQ5VT28 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
FAM27BQ5VT28 AP006294.1-201ENST00000415407 339 ntBASIC13.29□□□□□ -0.28
FAM27BQ5VT28 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.29□□□□□ -0.28
FAM27BQ5VT28 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.29□□□□□ -0.28
FAM27BQ5VT28 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
FAM27BQ5VT28 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
FAM27BQ5VT28 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.29□□□□□ -0.28
FAM27BQ5VT28 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.29□□□□□ -0.28
FAM27BQ5VT28 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
FAM27BQ5VT28 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC13.29□□□□□ -0.28
FAM27BQ5VT28 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
FAM27BQ5VT28 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FAM27BQ5VT28 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
FAM27BQ5VT28 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms