Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 RGS5-216ENST00000449680 788 ntTSL 3 BASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 AL451007.2-201ENST00000632004 563 ntBASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 AL109809.1-201ENST00000418979 1367 ntBASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 AC136621.1-201ENST00000624017 2304 ntBASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 AC108734.2-201ENST00000420887 1069 ntBASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 RPS5-204ENST00000598098 536 ntTSL 2 BASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 AP003392.6-201ENST00000607709 325 ntBASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
VPS13DQ5THJ4 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
VPS13DQ5THJ4 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
VPS13DQ5THJ4 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
VPS13DQ5THJ4 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
VPS13DQ5THJ4 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
VPS13DQ5THJ4 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
VPS13DQ5THJ4 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC9.88□□□□□ -0.83
VPS13DQ5THJ4 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
VPS13DQ5THJ4 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
VPS13DQ5THJ4 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC9.88□□□□□ -0.83
VPS13DQ5THJ4 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
VPS13DQ5THJ4 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC9.88□□□□□ -0.83
VPS13DQ5THJ4 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC9.88□□□□□ -0.83
VPS13DQ5THJ4 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC9.88□□□□□ -0.83
VPS13DQ5THJ4 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC9.88□□□□□ -0.83
VPS13DQ5THJ4 MRPL37P1-201ENST00000592451 1337 ntBASIC9.88□□□□□ -0.83
VPS13DQ5THJ4 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
VPS13DQ5THJ4 PYY2-201ENST00000315776 282 ntBASIC9.88□□□□□ -0.83
VPS13DQ5THJ4 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
VPS13DQ5THJ4 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
VPS13DQ5THJ4 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
VPS13DQ5THJ4 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
VPS13DQ5THJ4 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
VPS13DQ5THJ4 ITGA9-AS1-205ENST00000438136 578 ntTSL 4 BASIC9.88□□□□□ -0.83
VPS13DQ5THJ4 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC9.88□□□□□ -0.83
VPS13DQ5THJ4 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC9.88□□□□□ -0.83
VPS13DQ5THJ4 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC9.88□□□□□ -0.83
VPS13DQ5THJ4 RN7SL470P-201ENST00000583069 259 ntBASIC9.88□□□□□ -0.83
VPS13DQ5THJ4 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
VPS13DQ5THJ4 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
VPS13DQ5THJ4 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC9.88□□□□□ -0.83
VPS13DQ5THJ4 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
VPS13DQ5THJ4 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC9.88□□□□□ -0.83
VPS13DQ5THJ4 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
VPS13DQ5THJ4 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
VPS13DQ5THJ4 PSMD4P1-201ENST00000433951 1109 ntBASIC9.88□□□□□ -0.83
VPS13DQ5THJ4 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC9.88□□□□□ -0.83
VPS13DQ5THJ4 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC9.88□□□□□ -0.83
VPS13DQ5THJ4 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC9.88□□□□□ -0.83
VPS13DQ5THJ4 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
VPS13DQ5THJ4 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
VPS13DQ5THJ4 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
VPS13DQ5THJ4 ORAOV1P1-201ENST00000503108 395 ntBASIC9.88□□□□□ -0.83
VPS13DQ5THJ4 AC114947.1-202ENST00000514136 344 ntBASIC9.88□□□□□ -0.83
VPS13DQ5THJ4 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC9.88□□□□□ -0.83
VPS13DQ5THJ4 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC9.88□□□□□ -0.83
VPS13DQ5THJ4 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC9.88□□□□□ -0.83
VPS13DQ5THJ4 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
VPS13DQ5THJ4 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
VPS13DQ5THJ4 SSR4P1-203ENST00000599569 2260 ntBASIC9.87□□□□□ -0.83
VPS13DQ5THJ4 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
VPS13DQ5THJ4 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC9.87□□□□□ -0.83
VPS13DQ5THJ4 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
VPS13DQ5THJ4 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC9.87□□□□□ -0.83
VPS13DQ5THJ4 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
VPS13DQ5THJ4 MBP-201ENST00000354542 575 ntTSL 2 BASIC9.87□□□□□ -0.83
VPS13DQ5THJ4 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
VPS13DQ5THJ4 AC092638.2-201ENST00000441105 947 ntBASIC9.87□□□□□ -0.83
VPS13DQ5THJ4 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC9.87□□□□□ -0.83
VPS13DQ5THJ4 DNM1P51-201ENST00000558149 522 ntBASIC9.87□□□□□ -0.83
VPS13DQ5THJ4 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
VPS13DQ5THJ4 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC9.87□□□□□ -0.83
VPS13DQ5THJ4 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC9.87□□□□□ -0.83
VPS13DQ5THJ4 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
VPS13DQ5THJ4 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
VPS13DQ5THJ4 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC9.87□□□□□ -0.83
VPS13DQ5THJ4 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
VPS13DQ5THJ4 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC9.87□□□□□ -0.83
VPS13DQ5THJ4 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
VPS13DQ5THJ4 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC9.87□□□□□ -0.83
VPS13DQ5THJ4 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC9.87□□□□□ -0.83
VPS13DQ5THJ4 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
VPS13DQ5THJ4 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
VPS13DQ5THJ4 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC9.87□□□□□ -0.83
VPS13DQ5THJ4 MROH4P-201ENST00000431302 1578 ntBASIC9.87□□□□□ -0.83
VPS13DQ5THJ4 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms