Protein–RNA interactions for Protein: Q3B726

TWISTNB, DNA-directed RNA polymerase I subunit RPA43, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWISTNBQ3B726 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC19.42■□□□□ 0.7
TWISTNBQ3B726 SF1-209ENST00000433274 2317 ntTSL 2 BASIC19.42■□□□□ 0.7
TWISTNBQ3B726 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC19.42■□□□□ 0.7
TWISTNBQ3B726 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TWISTNBQ3B726 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC19.42■□□□□ 0.7
TWISTNBQ3B726 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC19.42■□□□□ 0.7
TWISTNBQ3B726 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TWISTNBQ3B726 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TWISTNBQ3B726 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TWISTNBQ3B726 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
TWISTNBQ3B726 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC19.42■□□□□ 0.7
TWISTNBQ3B726 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TWISTNBQ3B726 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TWISTNBQ3B726 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC19.42■□□□□ 0.7
TWISTNBQ3B726 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC19.42■□□□□ 0.7
TWISTNBQ3B726 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TWISTNBQ3B726 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC19.42■□□□□ 0.7
TWISTNBQ3B726 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC19.42■□□□□ 0.7
TWISTNBQ3B726 MESTP3-201ENST00000503460 968 ntBASIC19.42■□□□□ 0.7
TWISTNBQ3B726 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC19.42■□□□□ 0.7
TWISTNBQ3B726 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC19.42■□□□□ 0.7
TWISTNBQ3B726 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC19.42■□□□□ 0.7
TWISTNBQ3B726 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC19.42■□□□□ 0.7
TWISTNBQ3B726 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC19.42■□□□□ 0.7
TWISTNBQ3B726 AC138466.3-201ENST00000619983 221 ntBASIC19.42■□□□□ 0.7
TWISTNBQ3B726 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC19.42■□□□□ 0.7
TWISTNBQ3B726 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TWISTNBQ3B726 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC19.42■□□□□ 0.7
TWISTNBQ3B726 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC19.42■□□□□ 0.7
TWISTNBQ3B726 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TWISTNBQ3B726 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TWISTNBQ3B726 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TWISTNBQ3B726 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
TWISTNBQ3B726 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TWISTNBQ3B726 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
TWISTNBQ3B726 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TWISTNBQ3B726 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
TWISTNBQ3B726 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TWISTNBQ3B726 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC19.41■□□□□ 0.7
TWISTNBQ3B726 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TWISTNBQ3B726 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TWISTNBQ3B726 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TWISTNBQ3B726 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TWISTNBQ3B726 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TWISTNBQ3B726 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TWISTNBQ3B726 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TWISTNBQ3B726 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
TWISTNBQ3B726 STX1A-203ENST00000395155 783 ntTSL 2 BASIC19.41■□□□□ 0.7
TWISTNBQ3B726 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TWISTNBQ3B726 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TWISTNBQ3B726 HLA-V-201ENST00000429037 534 ntBASIC19.41■□□□□ 0.7
TWISTNBQ3B726 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC19.41■□□□□ 0.7
TWISTNBQ3B726 CSF2RBP1-201ENST00000447905 391 ntBASIC19.41■□□□□ 0.7
TWISTNBQ3B726 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC19.41■□□□□ 0.7
TWISTNBQ3B726 AP003171.2-201ENST00000528208 925 ntBASIC19.41■□□□□ 0.7
TWISTNBQ3B726 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC19.41■□□□□ 0.7
TWISTNBQ3B726 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC19.41■□□□□ 0.7
TWISTNBQ3B726 AL008721.1-201ENST00000609964 604 ntBASIC19.41■□□□□ 0.7
TWISTNBQ3B726 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TWISTNBQ3B726 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC19.41■□□□□ 0.7
TWISTNBQ3B726 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC19.41■□□□□ 0.7
TWISTNBQ3B726 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC19.41■□□□□ 0.7
TWISTNBQ3B726 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TWISTNBQ3B726 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TWISTNBQ3B726 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TWISTNBQ3B726 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TWISTNBQ3B726 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TWISTNBQ3B726 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC19.41■□□□□ 0.7
TWISTNBQ3B726 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TWISTNBQ3B726 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC19.41■□□□□ 0.7
TWISTNBQ3B726 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
TWISTNBQ3B726 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TWISTNBQ3B726 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TWISTNBQ3B726 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TWISTNBQ3B726 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TWISTNBQ3B726 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
TWISTNBQ3B726 TNRC18P2-201ENST00000417666 2714 ntBASIC19.4■□□□□ 0.7
TWISTNBQ3B726 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TWISTNBQ3B726 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC19.4■□□□□ 0.7
TWISTNBQ3B726 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TWISTNBQ3B726 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TWISTNBQ3B726 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TWISTNBQ3B726 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TWISTNBQ3B726 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TWISTNBQ3B726 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC19.4■□□□□ 0.7
TWISTNBQ3B726 MIR1202-201ENST00000408529 83 ntBASIC19.4■□□□□ 0.7
TWISTNBQ3B726 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TWISTNBQ3B726 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC19.4■□□□□ 0.7
TWISTNBQ3B726 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TWISTNBQ3B726 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC19.4■□□□□ 0.7
TWISTNBQ3B726 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC19.4■□□□□ 0.7
TWISTNBQ3B726 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC19.4■□□□□ 0.7
TWISTNBQ3B726 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TWISTNBQ3B726 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
TWISTNBQ3B726 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TWISTNBQ3B726 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TWISTNBQ3B726 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TWISTNBQ3B726 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
TWISTNBQ3B726 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TWISTNBQ3B726 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms