Protein–RNA interactions for Protein: Q16394

EXT1, Exostosin-1, humanhuman

Predictions only

Length 746 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1Q16394 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
EXT1Q16394 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.01□□□□□ -0.17
EXT1Q16394 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
EXT1Q16394 AC106820.3-201ENST00000561653 397 ntBASIC14.01□□□□□ -0.17
EXT1Q16394 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC14.01□□□□□ -0.17
EXT1Q16394 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.01□□□□□ -0.17
EXT1Q16394 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.01□□□□□ -0.17
EXT1Q16394 MIR4741-201ENST00000579822 90 ntBASIC14.01□□□□□ -0.17
EXT1Q16394 AC091271.1-201ENST00000611877 1162 ntBASIC14.01□□□□□ -0.17
EXT1Q16394 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.01□□□□□ -0.17
EXT1Q16394 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
EXT1Q16394 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
EXT1Q16394 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
EXT1Q16394 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
EXT1Q16394 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
EXT1Q16394 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.01□□□□□ -0.17
EXT1Q16394 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.01□□□□□ -0.17
EXT1Q16394 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.01□□□□□ -0.17
EXT1Q16394 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
EXT1Q16394 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.01□□□□□ -0.17
EXT1Q16394 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.01□□□□□ -0.17
EXT1Q16394 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
EXT1Q16394 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC14.01□□□□□ -0.17
EXT1Q16394 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
EXT1Q16394 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
EXT1Q16394 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.01□□□□□ -0.17
EXT1Q16394 LINC00554-201ENST00000564841 3011 ntBASIC14.01□□□□□ -0.17
EXT1Q16394 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.01□□□□□ -0.17
EXT1Q16394 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.01□□□□□ -0.17
EXT1Q16394 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
EXT1Q16394 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14□□□□□ -0.17
EXT1Q16394 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
EXT1Q16394 AC015818.8-201ENST00000587907 1519 ntBASIC14□□□□□ -0.17
EXT1Q16394 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
EXT1Q16394 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
EXT1Q16394 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14□□□□□ -0.17
EXT1Q16394 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
EXT1Q16394 AC103702.1-201ENST00000548801 2630 ntBASIC14□□□□□ -0.17
EXT1Q16394 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
EXT1Q16394 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
EXT1Q16394 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14□□□□□ -0.17
EXT1Q16394 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
EXT1Q16394 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14□□□□□ -0.17
EXT1Q16394 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14□□□□□ -0.17
EXT1Q16394 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
EXT1Q16394 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
EXT1Q16394 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14□□□□□ -0.17
EXT1Q16394 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14□□□□□ -0.17
EXT1Q16394 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
EXT1Q16394 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
EXT1Q16394 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
EXT1Q16394 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
EXT1Q16394 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
EXT1Q16394 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14□□□□□ -0.17
EXT1Q16394 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
EXT1Q16394 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14□□□□□ -0.17
EXT1Q16394 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14□□□□□ -0.17
EXT1Q16394 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14□□□□□ -0.17
EXT1Q16394 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC14□□□□□ -0.17
EXT1Q16394 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
EXT1Q16394 AC079178.1-201ENST00000420915 656 ntBASIC14□□□□□ -0.17
EXT1Q16394 MTX1P1-201ENST00000440904 838 ntBASIC14□□□□□ -0.17
EXT1Q16394 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14□□□□□ -0.17
EXT1Q16394 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14□□□□□ -0.17
EXT1Q16394 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC14□□□□□ -0.17
EXT1Q16394 AP006547.1-201ENST00000563435 692 ntBASIC14□□□□□ -0.17
EXT1Q16394 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14□□□□□ -0.17
EXT1Q16394 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14□□□□□ -0.17
EXT1Q16394 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
EXT1Q16394 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
EXT1Q16394 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
EXT1Q16394 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14□□□□□ -0.17
EXT1Q16394 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
EXT1Q16394 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
EXT1Q16394 SLC9A7P1-202ENST00000556476 2239 ntBASIC14□□□□□ -0.17
EXT1Q16394 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
EXT1Q16394 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
EXT1Q16394 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14□□□□□ -0.17
EXT1Q16394 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
EXT1Q16394 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14□□□□□ -0.17
EXT1Q16394 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14□□□□□ -0.17
EXT1Q16394 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14□□□□□ -0.17
EXT1Q16394 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
EXT1Q16394 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC14□□□□□ -0.17
EXT1Q16394 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
EXT1Q16394 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
EXT1Q16394 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14□□□□□ -0.17
EXT1Q16394 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
EXT1Q16394 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC13.99□□□□□ -0.17
EXT1Q16394 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
EXT1Q16394 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.99□□□□□ -0.17
EXT1Q16394 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.99□□□□□ -0.17
EXT1Q16394 AC068418.2-201ENST00000577309 3703 ntBASIC13.99□□□□□ -0.17
EXT1Q16394 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
EXT1Q16394 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
EXT1Q16394 FKBP4P6-201ENST00000457486 1332 ntBASIC13.99□□□□□ -0.17
EXT1Q16394 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.99□□□□□ -0.17
EXT1Q16394 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
EXT1Q16394 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
EXT1Q16394 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms