Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.48□□□□□ -0.09
SKP1P63208 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SKP1P63208 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.48□□□□□ -0.09
SKP1P63208 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SKP1P63208 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC14.48□□□□□ -0.09
SKP1P63208 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SKP1P63208 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.48□□□□□ -0.09
SKP1P63208 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SKP1P63208 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SKP1P63208 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC14.47□□□□□ -0.09
SKP1P63208 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SKP1P63208 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SKP1P63208 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SKP1P63208 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SKP1P63208 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SKP1P63208 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SKP1P63208 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SKP1P63208 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SKP1P63208 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.47□□□□□ -0.09
SKP1P63208 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
SKP1P63208 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.47□□□□□ -0.09
SKP1P63208 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.47□□□□□ -0.09
SKP1P63208 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC14.47□□□□□ -0.09
SKP1P63208 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.47□□□□□ -0.09
SKP1P63208 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.47□□□□□ -0.09
SKP1P63208 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.47□□□□□ -0.09
SKP1P63208 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SKP1P63208 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.47□□□□□ -0.09
SKP1P63208 AC132938.2-201ENST00000579188 680 ntBASIC14.47□□□□□ -0.09
SKP1P63208 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
SKP1P63208 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SKP1P63208 IGHV3-72-202ENST00000621503 303 ntBASIC14.47□□□□□ -0.09
SKP1P63208 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.47□□□□□ -0.09
SKP1P63208 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
SKP1P63208 AL591163.1-201ENST00000641757 987 ntBASIC14.47□□□□□ -0.09
SKP1P63208 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
SKP1P63208 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.47□□□□□ -0.09
SKP1P63208 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SKP1P63208 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SKP1P63208 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SKP1P63208 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.47□□□□□ -0.09
SKP1P63208 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SKP1P63208 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SKP1P63208 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SKP1P63208 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
SKP1P63208 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.47□□□□□ -0.09
SKP1P63208 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
SKP1P63208 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SKP1P63208 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SKP1P63208 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC14.47□□□□□ -0.09
SKP1P63208 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.47□□□□□ -0.09
SKP1P63208 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
SKP1P63208 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SKP1P63208 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SKP1P63208 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SKP1P63208 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SKP1P63208 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SKP1P63208 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SKP1P63208 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.46□□□□□ -0.09
SKP1P63208 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SKP1P63208 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SKP1P63208 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SKP1P63208 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SKP1P63208 AL360270.3-201ENST00000609118 1348 ntBASIC14.46□□□□□ -0.09
SKP1P63208 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SKP1P63208 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SKP1P63208 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SKP1P63208 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
SKP1P63208 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SKP1P63208 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SKP1P63208 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SKP1P63208 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.46□□□□□ -0.09
SKP1P63208 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
SKP1P63208 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
SKP1P63208 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
SKP1P63208 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC14.46□□□□□ -0.09
SKP1P63208 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SKP1P63208 RNU1-114P-201ENST00000365297 166 ntBASIC14.46□□□□□ -0.09
SKP1P63208 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
SKP1P63208 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.46□□□□□ -0.09
SKP1P63208 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.46□□□□□ -0.09
SKP1P63208 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.46□□□□□ -0.09
SKP1P63208 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.46□□□□□ -0.09
SKP1P63208 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
SKP1P63208 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
SKP1P63208 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SKP1P63208 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.46□□□□□ -0.09
SKP1P63208 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC14.46□□□□□ -0.09
SKP1P63208 BTNL10-201ENST00000595971 695 ntBASIC14.46□□□□□ -0.09
SKP1P63208 AC008735.3-201ENST00000596646 500 ntBASIC14.46□□□□□ -0.09
SKP1P63208 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
SKP1P63208 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.46□□□□□ -0.09
SKP1P63208 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
SKP1P63208 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
SKP1P63208 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
SKP1P63208 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.46□□□□□ -0.09
SKP1P63208 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
SKP1P63208 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
SKP1P63208 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.46□□□□□ -0.09
SKP1P63208 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms