Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC10.78□□□□□ -0.68
CKS1BP61024 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CKS1BP61024 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CKS1BP61024 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CKS1BP61024 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC10.78□□□□□ -0.68
CKS1BP61024 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CKS1BP61024 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CKS1BP61024 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC10.78□□□□□ -0.68
CKS1BP61024 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC10.78□□□□□ -0.68
CKS1BP61024 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
CKS1BP61024 DUSP5P1-201ENST00000441325 1139 ntBASIC10.78□□□□□ -0.68
CKS1BP61024 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC10.78□□□□□ -0.68
CKS1BP61024 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC10.78□□□□□ -0.68
CKS1BP61024 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
CKS1BP61024 MOK-208ENST00000519058 917 ntTSL 2 BASIC10.78□□□□□ -0.68
CKS1BP61024 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC10.78□□□□□ -0.68
CKS1BP61024 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC10.78□□□□□ -0.68
CKS1BP61024 QPRT-203ENST00000562473 579 ntTSL 3 BASIC10.78□□□□□ -0.68
CKS1BP61024 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CKS1BP61024 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC10.78□□□□□ -0.68
CKS1BP61024 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC10.78□□□□□ -0.68
CKS1BP61024 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC10.78□□□□□ -0.68
CKS1BP61024 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC10.78□□□□□ -0.68
CKS1BP61024 NUMA1-233ENST00000616538 6998 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
CKS1BP61024 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CKS1BP61024 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
CKS1BP61024 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC10.78□□□□□ -0.68
CKS1BP61024 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC10.78□□□□□ -0.68
CKS1BP61024 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CKS1BP61024 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC10.78□□□□□ -0.68
CKS1BP61024 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC10.78□□□□□ -0.68
CKS1BP61024 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
CKS1BP61024 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
CKS1BP61024 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
CKS1BP61024 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
CKS1BP61024 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC10.78□□□□□ -0.68
CKS1BP61024 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CKS1BP61024 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
CKS1BP61024 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CKS1BP61024 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC10.78□□□□□ -0.68
CKS1BP61024 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC10.78□□□□□ -0.68
CKS1BP61024 PLEKHG2-203ENST00000425673 8132 ntAPPRIS P2 TSL 2 BASIC10.78□□□□□ -0.68
CKS1BP61024 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CKS1BP61024 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
CKS1BP61024 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC10.78□□□□□ -0.68
CKS1BP61024 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
CKS1BP61024 AC136759.1-202ENST00000530858 2194 ntBASIC10.77□□□□□ -0.68
CKS1BP61024 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
CKS1BP61024 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC10.77□□□□□ -0.68
CKS1BP61024 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC10.77□□□□□ -0.68
CKS1BP61024 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
CKS1BP61024 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
CKS1BP61024 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.68
CKS1BP61024 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
CKS1BP61024 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
CKS1BP61024 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC10.77□□□□□ -0.68
CKS1BP61024 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
CKS1BP61024 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
CKS1BP61024 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC10.77□□□□□ -0.68
CKS1BP61024 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC10.77□□□□□ -0.68
CKS1BP61024 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
CKS1BP61024 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CKS1BP61024 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CKS1BP61024 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
CKS1BP61024 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC10.77□□□□□ -0.69
CKS1BP61024 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CKS1BP61024 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CKS1BP61024 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
CKS1BP61024 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CKS1BP61024 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CKS1BP61024 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CKS1BP61024 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
CKS1BP61024 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.69
CKS1BP61024 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CKS1BP61024 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
CKS1BP61024 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CKS1BP61024 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC10.77□□□□□ -0.69
CKS1BP61024 TSPY19P-201ENST00000418461 509 ntBASIC10.77□□□□□ -0.69
CKS1BP61024 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
CKS1BP61024 KRT18P27-201ENST00000427733 1299 ntBASIC10.77□□□□□ -0.69
CKS1BP61024 TSPY18P-201ENST00000441642 509 ntBASIC10.77□□□□□ -0.69
CKS1BP61024 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC10.77□□□□□ -0.69
CKS1BP61024 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC10.77□□□□□ -0.69
CKS1BP61024 CXCL1P1-201ENST00000502804 216 ntBASIC10.77□□□□□ -0.69
CKS1BP61024 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC10.77□□□□□ -0.69
CKS1BP61024 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
CKS1BP61024 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC10.77□□□□□ -0.69
CKS1BP61024 CD63-210ENST00000550776 870 ntTSL 5 BASIC10.77□□□□□ -0.69
CKS1BP61024 AC105339.3-201ENST00000560043 636 ntBASIC10.77□□□□□ -0.69
CKS1BP61024 AL109954.1-202ENST00000564051 2148 ntBASIC10.77□□□□□ -0.69
CKS1BP61024 HADH-212ENST00000638621 741 ntTSL 5 BASIC10.77□□□□□ -0.69
CKS1BP61024 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC10.77□□□□□ -0.69
CKS1BP61024 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CKS1BP61024 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC10.77□□□□□ -0.69
CKS1BP61024 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.69
CKS1BP61024 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC10.77□□□□□ -0.69
CKS1BP61024 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
CKS1BP61024 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
CKS1BP61024 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CKS1BP61024 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC10.77□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms