Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.2□□□□□ -0.14
PER3P56645 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PER3P56645 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
PER3P56645 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PER3P56645 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PER3P56645 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PER3P56645 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.19□□□□□ -0.14
PER3P56645 AC007191.1-201ENST00000623179 2995 ntBASIC14.19□□□□□ -0.14
PER3P56645 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.19□□□□□ -0.14
PER3P56645 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PER3P56645 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC14.19□□□□□ -0.14
PER3P56645 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PER3P56645 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.19□□□□□ -0.14
PER3P56645 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PER3P56645 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.19□□□□□ -0.14
PER3P56645 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.19□□□□□ -0.14
PER3P56645 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PER3P56645 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC14.19□□□□□ -0.14
PER3P56645 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PER3P56645 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PER3P56645 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
PER3P56645 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PER3P56645 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PER3P56645 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PER3P56645 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.19□□□□□ -0.14
PER3P56645 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC14.19□□□□□ -0.14
PER3P56645 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PER3P56645 USB1-202ENST00000423271 1217 ntTSL 2 BASIC14.19□□□□□ -0.14
PER3P56645 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.19□□□□□ -0.14
PER3P56645 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.19□□□□□ -0.14
PER3P56645 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC14.19□□□□□ -0.14
PER3P56645 BCRP2-202ENST00000447763 634 ntBASIC14.19□□□□□ -0.14
PER3P56645 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.19□□□□□ -0.14
PER3P56645 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.19□□□□□ -0.14
PER3P56645 BCRP6-201ENST00000510112 632 ntBASIC14.19□□□□□ -0.14
PER3P56645 BCRP7-201ENST00000511549 544 ntBASIC14.19□□□□□ -0.14
PER3P56645 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.19□□□□□ -0.14
PER3P56645 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.19□□□□□ -0.14
PER3P56645 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
PER3P56645 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.19□□□□□ -0.14
PER3P56645 IGHV3OR16-16-201ENST00000563644 343 ntBASIC14.19□□□□□ -0.14
PER3P56645 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.19□□□□□ -0.14
PER3P56645 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PER3P56645 RETN-203ENST00000629642 400 ntTSL 5 BASIC14.19□□□□□ -0.14
PER3P56645 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC14.19□□□□□ -0.14
PER3P56645 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
PER3P56645 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
PER3P56645 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PER3P56645 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PER3P56645 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
PER3P56645 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PER3P56645 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PER3P56645 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
PER3P56645 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.19□□□□□ -0.14
PER3P56645 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
PER3P56645 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PER3P56645 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
PER3P56645 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
PER3P56645 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
PER3P56645 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.18□□□□□ -0.14
PER3P56645 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PER3P56645 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC14.18□□□□□ -0.14
PER3P56645 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
PER3P56645 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.18□□□□□ -0.14
PER3P56645 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC14.18□□□□□ -0.14
PER3P56645 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
PER3P56645 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.18□□□□□ -0.14
PER3P56645 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PER3P56645 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
PER3P56645 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.18□□□□□ -0.14
PER3P56645 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
PER3P56645 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.18□□□□□ -0.14
PER3P56645 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.18□□□□□ -0.14
PER3P56645 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PER3P56645 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.18□□□□□ -0.14
PER3P56645 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PER3P56645 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
PER3P56645 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
PER3P56645 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PER3P56645 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC14.18□□□□□ -0.14
PER3P56645 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.18□□□□□ -0.14
PER3P56645 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.18□□□□□ -0.14
PER3P56645 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.18□□□□□ -0.14
PER3P56645 TPI1-206ENST00000488464 791 ntTSL 5 BASIC14.18□□□□□ -0.14
PER3P56645 HNRNPA1P13-201ENST00000510646 963 ntBASIC14.18□□□□□ -0.14
PER3P56645 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PER3P56645 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.18□□□□□ -0.14
PER3P56645 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
PER3P56645 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PER3P56645 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.18□□□□□ -0.14
PER3P56645 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.18□□□□□ -0.14
PER3P56645 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
PER3P56645 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PER3P56645 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.18□□□□□ -0.14
PER3P56645 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.18□□□□□ -0.14
PER3P56645 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
PER3P56645 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.18□□□□□ -0.14
PER3P56645 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
PER3P56645 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
PER3P56645 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms