Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.75□□□□□ -0.21
SUMO3P55854 MIR600HG-201ENST00000449175 5984 ntBASIC13.75□□□□□ -0.21
SUMO3P55854 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.75□□□□□ -0.21
SUMO3P55854 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.75□□□□□ -0.21
SUMO3P55854 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SUMO3P55854 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.75□□□□□ -0.21
SUMO3P55854 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
SUMO3P55854 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SUMO3P55854 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.74□□□□□ -0.21
SUMO3P55854 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SUMO3P55854 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SUMO3P55854 FGD5P1-202ENST00000614866 2498 ntBASIC13.74□□□□□ -0.21
SUMO3P55854 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SUMO3P55854 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
SUMO3P55854 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
SUMO3P55854 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SUMO3P55854 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
SUMO3P55854 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SUMO3P55854 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SUMO3P55854 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SUMO3P55854 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SUMO3P55854 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.74□□□□□ -0.21
SUMO3P55854 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
SUMO3P55854 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SUMO3P55854 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.74□□□□□ -0.21
SUMO3P55854 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SUMO3P55854 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SUMO3P55854 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SUMO3P55854 AC018665.1-201ENST00000622927 1362 ntBASIC13.74□□□□□ -0.21
SUMO3P55854 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
SUMO3P55854 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.74□□□□□ -0.21
SUMO3P55854 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SUMO3P55854 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SUMO3P55854 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SUMO3P55854 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SUMO3P55854 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SUMO3P55854 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
SUMO3P55854 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SUMO3P55854 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SUMO3P55854 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
SUMO3P55854 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.74□□□□□ -0.21
SUMO3P55854 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.74□□□□□ -0.21
SUMO3P55854 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
SUMO3P55854 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.74□□□□□ -0.21
SUMO3P55854 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.74□□□□□ -0.21
SUMO3P55854 KRT43P-201ENST00000434019 910 ntBASIC13.74□□□□□ -0.21
SUMO3P55854 C2orf27AP3-201ENST00000434123 579 ntBASIC13.74□□□□□ -0.21
SUMO3P55854 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.74□□□□□ -0.21
SUMO3P55854 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.74□□□□□ -0.21
SUMO3P55854 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SUMO3P55854 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
SUMO3P55854 SLC25A47P1-201ENST00000531577 414 ntBASIC13.74□□□□□ -0.21
SUMO3P55854 RPL28-207ENST00000558815 616 ntTSL 2 BASIC13.74□□□□□ -0.21
SUMO3P55854 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.74□□□□□ -0.21
SUMO3P55854 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.74□□□□□ -0.21
SUMO3P55854 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
SUMO3P55854 AC132938.2-201ENST00000579188 680 ntBASIC13.74□□□□□ -0.21
SUMO3P55854 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.74□□□□□ -0.21
SUMO3P55854 BTNL10-201ENST00000595971 695 ntBASIC13.74□□□□□ -0.21
SUMO3P55854 AL354718.3-201ENST00000616414 581 ntBASIC13.74□□□□□ -0.21
SUMO3P55854 IGHV3-72-202ENST00000621503 303 ntBASIC13.74□□□□□ -0.21
SUMO3P55854 CR382287.1-201ENST00000623954 586 ntBASIC13.74□□□□□ -0.21
SUMO3P55854 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SUMO3P55854 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.74□□□□□ -0.21
SUMO3P55854 AL591163.1-201ENST00000641757 987 ntBASIC13.74□□□□□ -0.21
SUMO3P55854 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
SUMO3P55854 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SUMO3P55854 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SUMO3P55854 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SUMO3P55854 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
SUMO3P55854 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SUMO3P55854 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
SUMO3P55854 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
SUMO3P55854 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.74□□□□□ -0.21
SUMO3P55854 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.74□□□□□ -0.21
SUMO3P55854 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
SUMO3P55854 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.73□□□□□ -0.21
SUMO3P55854 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SUMO3P55854 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.73□□□□□ -0.21
SUMO3P55854 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SUMO3P55854 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.73□□□□□ -0.21
SUMO3P55854 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SUMO3P55854 MYO15B-237ENST00000642007 4893 ntBASIC13.73□□□□□ -0.21
SUMO3P55854 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SUMO3P55854 MSTO2P-201ENST00000314835 1709 ntBASIC13.73□□□□□ -0.21
SUMO3P55854 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SUMO3P55854 TNRC18P2-201ENST00000417666 2714 ntBASIC13.73□□□□□ -0.21
SUMO3P55854 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC13.73□□□□□ -0.21
SUMO3P55854 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SUMO3P55854 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.73□□□□□ -0.21
SUMO3P55854 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SUMO3P55854 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SUMO3P55854 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SUMO3P55854 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.73□□□□□ -0.21
SUMO3P55854 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.73□□□□□ -0.21
SUMO3P55854 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SUMO3P55854 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SUMO3P55854 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SUMO3P55854 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SUMO3P55854 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms