Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
FOXG1P55316 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
FOXG1P55316 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
FOXG1P55316 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FOXG1P55316 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
FOXG1P55316 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.3□□□□□ -0.28
FOXG1P55316 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FOXG1P55316 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FOXG1P55316 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
FOXG1P55316 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
FOXG1P55316 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.3□□□□□ -0.28
FOXG1P55316 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
FOXG1P55316 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FOXG1P55316 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.3□□□□□ -0.28
FOXG1P55316 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FOXG1P55316 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FOXG1P55316 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
FOXG1P55316 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FOXG1P55316 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.3□□□□□ -0.28
FOXG1P55316 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
FOXG1P55316 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.3□□□□□ -0.28
FOXG1P55316 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.3□□□□□ -0.28
FOXG1P55316 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.3□□□□□ -0.28
FOXG1P55316 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FOXG1P55316 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC13.3□□□□□ -0.28
FOXG1P55316 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC13.3□□□□□ -0.28
FOXG1P55316 POM121L8P-201ENST00000417732 1281 ntBASIC13.3□□□□□ -0.28
FOXG1P55316 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
FOXG1P55316 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.3□□□□□ -0.28
FOXG1P55316 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
FOXG1P55316 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
FOXG1P55316 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.3□□□□□ -0.28
FOXG1P55316 POM121L9P-203ENST00000441984 1285 ntBASIC13.3□□□□□ -0.28
FOXG1P55316 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.3□□□□□ -0.28
FOXG1P55316 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
FOXG1P55316 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.3□□□□□ -0.28
FOXG1P55316 AC133552.6-201ENST00000613406 534 ntBASIC13.3□□□□□ -0.28
FOXG1P55316 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.3□□□□□ -0.28
FOXG1P55316 ENPP7P14-201ENST00000621765 1040 ntBASIC13.3□□□□□ -0.28
FOXG1P55316 AC138951.2-201ENST00000623455 1161 ntBASIC13.3□□□□□ -0.28
FOXG1P55316 AC132938.4-201ENST00000623835 848 ntBASIC13.3□□□□□ -0.28
FOXG1P55316 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
FOXG1P55316 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
FOXG1P55316 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FOXG1P55316 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.3□□□□□ -0.28
FOXG1P55316 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.3□□□□□ -0.28
FOXG1P55316 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
FOXG1P55316 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
FOXG1P55316 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
FOXG1P55316 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FOXG1P55316 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FOXG1P55316 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FOXG1P55316 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
FOXG1P55316 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FOXG1P55316 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FOXG1P55316 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.3□□□□□ -0.28
FOXG1P55316 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FOXG1P55316 AC023090.2-201ENST00000625182 2110 ntBASIC13.3□□□□□ -0.28
FOXG1P55316 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
FOXG1P55316 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXG1P55316 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXG1P55316 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
FOXG1P55316 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXG1P55316 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.29□□□□□ -0.28
FOXG1P55316 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
FOXG1P55316 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
FOXG1P55316 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
FOXG1P55316 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXG1P55316 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXG1P55316 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXG1P55316 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXG1P55316 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.29□□□□□ -0.28
FOXG1P55316 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXG1P55316 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.29□□□□□ -0.28
FOXG1P55316 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXG1P55316 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.29□□□□□ -0.28
FOXG1P55316 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
FOXG1P55316 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.29□□□□□ -0.28
FOXG1P55316 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
FOXG1P55316 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
FOXG1P55316 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXG1P55316 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
FOXG1P55316 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXG1P55316 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXG1P55316 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXG1P55316 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
FOXG1P55316 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
FOXG1P55316 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXG1P55316 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.29□□□□□ -0.28
FOXG1P55316 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
FOXG1P55316 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
FOXG1P55316 MIR1202-201ENST00000408529 83 ntBASIC13.29□□□□□ -0.28
FOXG1P55316 HLA-V-201ENST00000429037 534 ntBASIC13.29□□□□□ -0.28
FOXG1P55316 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.29□□□□□ -0.28
FOXG1P55316 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.29□□□□□ -0.28
FOXG1P55316 CSF2RBP1-201ENST00000447905 391 ntBASIC13.29□□□□□ -0.28
FOXG1P55316 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.29□□□□□ -0.28
FOXG1P55316 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.29□□□□□ -0.28
FOXG1P55316 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.29□□□□□ -0.28
FOXG1P55316 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms