Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
HMGA2P52926 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.87□□□□□ -0.19
HMGA2P52926 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.87□□□□□ -0.19
HMGA2P52926 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
HMGA2P52926 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.87□□□□□ -0.19
HMGA2P52926 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HMGA2P52926 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.86□□□□□ -0.19
HMGA2P52926 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.86□□□□□ -0.19
HMGA2P52926 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HMGA2P52926 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HMGA2P52926 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.86□□□□□ -0.19
HMGA2P52926 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HMGA2P52926 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.86□□□□□ -0.19
HMGA2P52926 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
HMGA2P52926 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
HMGA2P52926 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HMGA2P52926 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
HMGA2P52926 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.86□□□□□ -0.19
HMGA2P52926 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HMGA2P52926 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HMGA2P52926 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HMGA2P52926 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
HMGA2P52926 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HMGA2P52926 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.86□□□□□ -0.19
HMGA2P52926 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HMGA2P52926 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HMGA2P52926 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.86□□□□□ -0.19
HMGA2P52926 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
HMGA2P52926 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC13.86□□□□□ -0.19
HMGA2P52926 AL353779.1-201ENST00000434793 351 ntBASIC13.86□□□□□ -0.19
HMGA2P52926 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.86□□□□□ -0.19
HMGA2P52926 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.86□□□□□ -0.19
HMGA2P52926 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC13.86□□□□□ -0.19
HMGA2P52926 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.86□□□□□ -0.19
HMGA2P52926 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC13.86□□□□□ -0.19
HMGA2P52926 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.86□□□□□ -0.19
HMGA2P52926 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.86□□□□□ -0.19
HMGA2P52926 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.86□□□□□ -0.19
HMGA2P52926 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC13.86□□□□□ -0.19
HMGA2P52926 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.86□□□□□ -0.19
HMGA2P52926 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.86□□□□□ -0.19
HMGA2P52926 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
HMGA2P52926 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.86□□□□□ -0.19
HMGA2P52926 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.86□□□□□ -0.19
HMGA2P52926 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HMGA2P52926 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
HMGA2P52926 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HMGA2P52926 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HMGA2P52926 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
HMGA2P52926 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HMGA2P52926 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
HMGA2P52926 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HMGA2P52926 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.86□□□□□ -0.19
HMGA2P52926 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HMGA2P52926 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.86□□□□□ -0.19
HMGA2P52926 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.86□□□□□ -0.19
HMGA2P52926 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
HMGA2P52926 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
HMGA2P52926 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HMGA2P52926 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
HMGA2P52926 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HMGA2P52926 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HMGA2P52926 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.85□□□□□ -0.19
HMGA2P52926 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.85□□□□□ -0.19
HMGA2P52926 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HMGA2P52926 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HMGA2P52926 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.85□□□□□ -0.19
HMGA2P52926 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HMGA2P52926 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
HMGA2P52926 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HMGA2P52926 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HMGA2P52926 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HMGA2P52926 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.85□□□□□ -0.19
HMGA2P52926 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HMGA2P52926 KRT8P14-201ENST00000414254 1442 ntBASIC13.85□□□□□ -0.19
HMGA2P52926 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
HMGA2P52926 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.85□□□□□ -0.19
HMGA2P52926 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.85□□□□□ -0.19
HMGA2P52926 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
HMGA2P52926 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.85□□□□□ -0.19
HMGA2P52926 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HMGA2P52926 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
HMGA2P52926 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.85□□□□□ -0.19
HMGA2P52926 TMEM198B-204ENST00000484016 896 ntBASIC13.85□□□□□ -0.19
HMGA2P52926 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
HMGA2P52926 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.85□□□□□ -0.19
HMGA2P52926 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC13.85□□□□□ -0.19
HMGA2P52926 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
HMGA2P52926 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.85□□□□□ -0.19
HMGA2P52926 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
HMGA2P52926 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC13.85□□□□□ -0.19
HMGA2P52926 AL391069.4-201ENST00000609583 481 ntBASIC13.85□□□□□ -0.19
HMGA2P52926 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.85□□□□□ -0.19
HMGA2P52926 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.85□□□□□ -0.19
HMGA2P52926 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.85□□□□□ -0.19
HMGA2P52926 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
HMGA2P52926 AL158070.2-201ENST00000623713 1621 ntBASIC13.85□□□□□ -0.19
HMGA2P52926 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
HMGA2P52926 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
HMGA2P52926 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms