Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.35□□□□□ -0.11
SMSP52788 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
SMSP52788 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMSP52788 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMSP52788 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMSP52788 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMSP52788 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
SMSP52788 KCP-203ENST00000610776 5108 ntTSL 5 BASIC14.35□□□□□ -0.11
SMSP52788 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.35□□□□□ -0.11
SMSP52788 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SMSP52788 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SMSP52788 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SMSP52788 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
SMSP52788 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMSP52788 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.34□□□□□ -0.11
SMSP52788 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SMSP52788 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMSP52788 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMSP52788 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMSP52788 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMSP52788 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SMSP52788 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
SMSP52788 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.34□□□□□ -0.11
SMSP52788 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMSP52788 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMSP52788 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMSP52788 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.34□□□□□ -0.11
SMSP52788 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SMSP52788 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.34□□□□□ -0.11
SMSP52788 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.34□□□□□ -0.11
SMSP52788 KRT43P-201ENST00000434019 910 ntBASIC14.34□□□□□ -0.11
SMSP52788 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.34□□□□□ -0.11
SMSP52788 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.34□□□□□ -0.11
SMSP52788 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.34□□□□□ -0.11
SMSP52788 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.34□□□□□ -0.11
SMSP52788 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SMSP52788 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14.34□□□□□ -0.11
SMSP52788 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC14.34□□□□□ -0.11
SMSP52788 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.34□□□□□ -0.11
SMSP52788 AC023310.3-201ENST00000557027 670 ntBASIC14.34□□□□□ -0.11
SMSP52788 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.34□□□□□ -0.11
SMSP52788 AC100756.1-201ENST00000562736 682 ntBASIC14.34□□□□□ -0.11
SMSP52788 AC138749.3-201ENST00000567691 622 ntBASIC14.34□□□□□ -0.11
SMSP52788 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.34□□□□□ -0.11
SMSP52788 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.34□□□□□ -0.11
SMSP52788 AC015936.2-201ENST00000593177 259 ntBASIC14.34□□□□□ -0.11
SMSP52788 AL512343.1-201ENST00000605837 169 ntBASIC14.34□□□□□ -0.11
SMSP52788 AC116165.1-201ENST00000611806 668 ntBASIC14.34□□□□□ -0.11
SMSP52788 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMSP52788 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SMSP52788 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.34□□□□□ -0.11
SMSP52788 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMSP52788 LINC00528-201ENST00000600723 2160 ntBASIC14.34□□□□□ -0.11
SMSP52788 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.34□□□□□ -0.11
SMSP52788 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMSP52788 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.34□□□□□ -0.11
SMSP52788 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.34□□□□□ -0.11
SMSP52788 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SMSP52788 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.34□□□□□ -0.11
SMSP52788 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.34□□□□□ -0.11
SMSP52788 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMSP52788 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMSP52788 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.34□□□□□ -0.11
SMSP52788 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
SMSP52788 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SMSP52788 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
SMSP52788 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC14.33□□□□□ -0.11
SMSP52788 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
SMSP52788 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.33□□□□□ -0.11
SMSP52788 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
SMSP52788 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.33□□□□□ -0.11
SMSP52788 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
SMSP52788 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SMSP52788 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SMSP52788 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.33□□□□□ -0.11
SMSP52788 ZBED1P1-201ENST00000502364 1930 ntBASIC14.33□□□□□ -0.11
SMSP52788 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
SMSP52788 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SMSP52788 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SMSP52788 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMSP52788 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMSP52788 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMSP52788 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.33□□□□□ -0.12
SMSP52788 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SMSP52788 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMSP52788 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
SMSP52788 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMSP52788 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMSP52788 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SMSP52788 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.33□□□□□ -0.12
SMSP52788 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SMSP52788 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMSP52788 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.33□□□□□ -0.12
SMSP52788 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMSP52788 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SMSP52788 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SMSP52788 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
SMSP52788 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.33□□□□□ -0.12
SMSP52788 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SMSP52788 ELK1P1-201ENST00000485699 580 ntBASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms