Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 ENDOV-203ENST00000517795 2548 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GTF2A1P52655 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
GTF2A1P52655 PCDHB19P-202ENST00000625133 2914 ntBASIC14.98□□□□□ -0.01
GTF2A1P52655 LHX6-204ENST00000394319 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GTF2A1P52655 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC14.98□□□□□ -0.01
GTF2A1P52655 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.98□□□□□ -0.01
GTF2A1P52655 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC14.98□□□□□ -0.01
GTF2A1P52655 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.98□□□□□ -0.01
GTF2A1P52655 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
GTF2A1P52655 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
GTF2A1P52655 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
GTF2A1P52655 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GTF2A1P52655 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC14.98□□□□□ -0.01
GTF2A1P52655 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
GTF2A1P52655 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC14.98□□□□□ -0.01
GTF2A1P52655 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
GTF2A1P52655 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC14.98□□□□□ -0.01
GTF2A1P52655 IGHV3-41-201ENST00000613121 348 ntBASIC14.98□□□□□ -0.01
GTF2A1P52655 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GTF2A1P52655 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
GTF2A1P52655 PLSCR4-203ENST00000433593 2839 ntTSL 2 BASIC14.98□□□□□ -0.01
GTF2A1P52655 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GTF2A1P52655 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
GTF2A1P52655 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
GTF2A1P52655 INPP5J-208ENST00000412277 3512 ntTSL 2 BASIC14.98□□□□□ -0.01
GTF2A1P52655 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GTF2A1P52655 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC14.98□□□□□ -0.01
GTF2A1P52655 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GTF2A1P52655 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.98□□□□□ -0.01
GTF2A1P52655 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GTF2A1P52655 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
GTF2A1P52655 PLB1-205ENST00000422425 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
GTF2A1P52655 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
GTF2A1P52655 CSPG4P11-201ENST00000560634 4910 ntBASIC14.98□□□□□ -0.01
GTF2A1P52655 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
GTF2A1P52655 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
GTF2A1P52655 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GTF2A1P52655 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
GTF2A1P52655 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
GTF2A1P52655 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GTF2A1P52655 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC14.97□□□□□ -0.01
GTF2A1P52655 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GTF2A1P52655 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GTF2A1P52655 CYP4F11-201ENST00000248041 2977 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GTF2A1P52655 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
GTF2A1P52655 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GTF2A1P52655 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
GTF2A1P52655 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GTF2A1P52655 TP53TG5-201ENST00000372726 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GTF2A1P52655 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GTF2A1P52655 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
GTF2A1P52655 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GTF2A1P52655 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC14.97□□□□□ -0.01
GTF2A1P52655 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GTF2A1P52655 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
GTF2A1P52655 MAP1S-202ENST00000544059 3399 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
GTF2A1P52655 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GTF2A1P52655 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GTF2A1P52655 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GTF2A1P52655 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GTF2A1P52655 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GTF2A1P52655 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GTF2A1P52655 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC14.97□□□□□ -0.01
GTF2A1P52655 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GTF2A1P52655 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.97□□□□□ -0.01
GTF2A1P52655 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.97□□□□□ -0.01
GTF2A1P52655 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.97□□□□□ -0.01
GTF2A1P52655 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC14.97□□□□□ -0.01
GTF2A1P52655 AC006011.2-201ENST00000621313 1158 ntBASIC14.97□□□□□ -0.01
GTF2A1P52655 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
GTF2A1P52655 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC14.97□□□□□ -0.01
GTF2A1P52655 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
GTF2A1P52655 GPD1-201ENST00000301149 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GTF2A1P52655 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
GTF2A1P52655 AP000437.1-201ENST00000624057 2085 ntBASIC14.97□□□□□ -0.01
GTF2A1P52655 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.97□□□□□ -0.01
GTF2A1P52655 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
GTF2A1P52655 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
GTF2A1P52655 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
GTF2A1P52655 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
GTF2A1P52655 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
GTF2A1P52655 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
GTF2A1P52655 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GTF2A1P52655 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.96□□□□□ -0.01
GTF2A1P52655 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GTF2A1P52655 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
GTF2A1P52655 AEBP1-201ENST00000223357 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GTF2A1P52655 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
GTF2A1P52655 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC14.96□□□□□ -0.01
GTF2A1P52655 VAMP7-202ENST00000286448 2646 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GTF2A1P52655 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
GTF2A1P52655 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.96□□□□□ -0.01
GTF2A1P52655 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
GTF2A1P52655 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
GTF2A1P52655 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
GTF2A1P52655 AC005521.1-201ENST00000393351 872 ntBASIC14.96□□□□□ -0.01
GTF2A1P52655 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
GTF2A1P52655 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC14.96□□□□□ -0.01
GTF2A1P52655 AK4P3-201ENST00000418260 669 ntBASIC14.96□□□□□ -0.01
GTF2A1P52655 AL645929.1-201ENST00000420084 975 ntBASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms