Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC16.68■□□□□ 0.26
CPT1AP50416 AL353770.1-201ENST00000614915 403 ntBASIC16.68■□□□□ 0.26
CPT1AP50416 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.68■□□□□ 0.26
CPT1AP50416 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CPT1AP50416 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CPT1AP50416 NFIC-211ENST00000641145 8399 ntBASIC16.68■□□□□ 0.26
CPT1AP50416 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
CPT1AP50416 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CPT1AP50416 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
CPT1AP50416 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.68■□□□□ 0.26
CPT1AP50416 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CPT1AP50416 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.68■□□□□ 0.26
CPT1AP50416 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CPT1AP50416 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CPT1AP50416 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CPT1AP50416 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPT1AP50416 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPT1AP50416 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.67■□□□□ 0.26
CPT1AP50416 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC16.67■□□□□ 0.26
CPT1AP50416 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CPT1AP50416 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
CPT1AP50416 LILRP1-201ENST00000444199 1370 ntBASIC16.67■□□□□ 0.26
CPT1AP50416 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPT1AP50416 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPT1AP50416 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.67■□□□□ 0.26
CPT1AP50416 AC068587.6-202ENST00000641839 5619 ntBASIC16.67■□□□□ 0.26
CPT1AP50416 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPT1AP50416 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPT1AP50416 AC244394.1-201ENST00000435000 1665 ntBASIC16.67■□□□□ 0.26
CPT1AP50416 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
CPT1AP50416 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPT1AP50416 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC16.67■□□□□ 0.26
CPT1AP50416 AC234782.1-201ENST00000451950 919 ntBASIC16.67■□□□□ 0.26
CPT1AP50416 HLA-J-204ENST00000495278 958 ntBASIC16.67■□□□□ 0.26
CPT1AP50416 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CPT1AP50416 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPT1AP50416 AL133499.1-201ENST00000596207 608 ntBASIC16.67■□□□□ 0.26
CPT1AP50416 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
CPT1AP50416 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC16.67■□□□□ 0.26
CPT1AP50416 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC16.67■□□□□ 0.26
CPT1AP50416 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CPT1AP50416 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.67■□□□□ 0.26
CPT1AP50416 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
CPT1AP50416 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CPT1AP50416 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CPT1AP50416 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.67■□□□□ 0.26
CPT1AP50416 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.67■□□□□ 0.26
CPT1AP50416 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC16.67■□□□□ 0.26
CPT1AP50416 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPT1AP50416 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CPT1AP50416 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.67■□□□□ 0.26
CPT1AP50416 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPT1AP50416 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CPT1AP50416 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.67■□□□□ 0.26
CPT1AP50416 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
CPT1AP50416 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
CPT1AP50416 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC16.67■□□□□ 0.26
CPT1AP50416 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.67■□□□□ 0.26
CPT1AP50416 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CPT1AP50416 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.66■□□□□ 0.26
CPT1AP50416 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPT1AP50416 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CPT1AP50416 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPT1AP50416 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPT1AP50416 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CPT1AP50416 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPT1AP50416 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC16.66■□□□□ 0.26
CPT1AP50416 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPT1AP50416 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPT1AP50416 AL391005.1-201ENST00000623953 2435 ntBASIC16.66■□□□□ 0.26
CPT1AP50416 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPT1AP50416 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CPT1AP50416 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPT1AP50416 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CPT1AP50416 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CPT1AP50416 MIR33B-201ENST00000385104 96 ntBASIC16.66■□□□□ 0.26
CPT1AP50416 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CPT1AP50416 ISCA2P1-201ENST00000425548 448 ntBASIC16.66■□□□□ 0.26
CPT1AP50416 VDAC1P1-201ENST00000439229 848 ntBASIC16.66■□□□□ 0.26
CPT1AP50416 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC16.66■□□□□ 0.26
CPT1AP50416 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC16.66■□□□□ 0.26
CPT1AP50416 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPT1AP50416 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CPT1AP50416 PRKXP1-201ENST00000561423 1122 ntBASIC16.66■□□□□ 0.26
CPT1AP50416 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
CPT1AP50416 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC16.66■□□□□ 0.26
CPT1AP50416 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPT1AP50416 AC020922.3-201ENST00000595064 547 ntBASIC16.66■□□□□ 0.26
CPT1AP50416 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.66■□□□□ 0.26
CPT1AP50416 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CPT1AP50416 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPT1AP50416 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CPT1AP50416 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
CPT1AP50416 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPT1AP50416 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPT1AP50416 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPT1AP50416 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
CPT1AP50416 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
CPT1AP50416 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
CPT1AP50416 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms