Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
SLC9A3P48764 LINC00628-201ENST00000628516 1289 ntBASIC14.05□□□□□ -0.16
SLC9A3P48764 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC9A3P48764 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC9A3P48764 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SLC9A3P48764 AC067750.1-201ENST00000608826 6545 ntBASIC14.05□□□□□ -0.16
SLC9A3P48764 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.05□□□□□ -0.16
SLC9A3P48764 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SLC9A3P48764 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
SLC9A3P48764 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC9A3P48764 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC9A3P48764 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
SLC9A3P48764 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
SLC9A3P48764 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC9A3P48764 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.05□□□□□ -0.16
SLC9A3P48764 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC9A3P48764 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.05□□□□□ -0.16
SLC9A3P48764 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC14.05□□□□□ -0.16
SLC9A3P48764 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.05□□□□□ -0.16
SLC9A3P48764 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.05□□□□□ -0.16
SLC9A3P48764 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC9A3P48764 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
SLC9A3P48764 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC9A3P48764 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
SLC9A3P48764 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.05□□□□□ -0.16
SLC9A3P48764 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC9A3P48764 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC9A3P48764 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.04□□□□□ -0.16
SLC9A3P48764 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC9A3P48764 INTS4P1-203ENST00000641008 3683 ntBASIC14.04□□□□□ -0.16
SLC9A3P48764 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC9A3P48764 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SLC9A3P48764 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
SLC9A3P48764 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
SLC9A3P48764 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC9A3P48764 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
SLC9A3P48764 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.04□□□□□ -0.16
SLC9A3P48764 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC9A3P48764 AL139385.1-201ENST00000611744 3272 ntBASIC14.04□□□□□ -0.16
SLC9A3P48764 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC9A3P48764 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC9A3P48764 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.04□□□□□ -0.16
SLC9A3P48764 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC9A3P48764 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
SLC9A3P48764 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC9A3P48764 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SLC9A3P48764 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SLC9A3P48764 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
SLC9A3P48764 CNN2P11-201ENST00000429351 262 ntBASIC14.04□□□□□ -0.16
SLC9A3P48764 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SLC9A3P48764 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.04□□□□□ -0.16
SLC9A3P48764 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.04□□□□□ -0.16
SLC9A3P48764 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.04□□□□□ -0.16
SLC9A3P48764 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.04□□□□□ -0.16
SLC9A3P48764 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.04□□□□□ -0.16
SLC9A3P48764 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
SLC9A3P48764 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
SLC9A3P48764 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
SLC9A3P48764 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC9A3P48764 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
SLC9A3P48764 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC9A3P48764 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC9A3P48764 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.04□□□□□ -0.16
SLC9A3P48764 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC9A3P48764 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.04□□□□□ -0.16
SLC9A3P48764 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC9A3P48764 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
SLC9A3P48764 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.04□□□□□ -0.16
SLC9A3P48764 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.04□□□□□ -0.16
SLC9A3P48764 BEND3P1-201ENST00000421591 1944 ntBASIC14.03□□□□□ -0.16
SLC9A3P48764 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.03□□□□□ -0.16
SLC9A3P48764 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
SLC9A3P48764 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC9A3P48764 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC9A3P48764 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SLC9A3P48764 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC9A3P48764 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SLC9A3P48764 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC9A3P48764 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC9A3P48764 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
SLC9A3P48764 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC9A3P48764 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.03□□□□□ -0.16
SLC9A3P48764 TOMM22P5-201ENST00000416399 439 ntBASIC14.03□□□□□ -0.16
SLC9A3P48764 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SLC9A3P48764 AC092865.5-201ENST00000545435 363 ntBASIC14.03□□□□□ -0.16
SLC9A3P48764 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC14.03□□□□□ -0.16
SLC9A3P48764 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.03□□□□□ -0.16
SLC9A3P48764 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC9A3P48764 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.03□□□□□ -0.16
SLC9A3P48764 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.03□□□□□ -0.16
SLC9A3P48764 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC9A3P48764 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.03□□□□□ -0.16
SLC9A3P48764 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SLC9A3P48764 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SLC9A3P48764 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
SLC9A3P48764 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SLC9A3P48764 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
SLC9A3P48764 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SLC9A3P48764 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
SLC9A3P48764 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms