Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TM4SF4P48230 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
TM4SF4P48230 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC16.89■□□□□ 0.29
TM4SF4P48230 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC16.89■□□□□ 0.29
TM4SF4P48230 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC16.89■□□□□ 0.29
TM4SF4P48230 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC16.89■□□□□ 0.29
TM4SF4P48230 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TM4SF4P48230 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TM4SF4P48230 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TM4SF4P48230 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TM4SF4P48230 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TM4SF4P48230 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TM4SF4P48230 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TM4SF4P48230 LILRP1-201ENST00000444199 1370 ntBASIC16.89■□□□□ 0.29
TM4SF4P48230 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC16.89■□□□□ 0.29
TM4SF4P48230 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TM4SF4P48230 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TM4SF4P48230 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC16.88■□□□□ 0.29
TM4SF4P48230 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.88■□□□□ 0.29
TM4SF4P48230 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
TM4SF4P48230 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TM4SF4P48230 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC16.88■□□□□ 0.29
TM4SF4P48230 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TM4SF4P48230 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TM4SF4P48230 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TM4SF4P48230 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TM4SF4P48230 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TM4SF4P48230 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TM4SF4P48230 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TM4SF4P48230 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TM4SF4P48230 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC16.88■□□□□ 0.29
TM4SF4P48230 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TM4SF4P48230 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC16.88■□□□□ 0.29
TM4SF4P48230 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC16.88■□□□□ 0.29
TM4SF4P48230 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
TM4SF4P48230 NME4-203ENST00000397722 1232 ntTSL 2 BASIC16.88■□□□□ 0.29
TM4SF4P48230 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC16.88■□□□□ 0.29
TM4SF4P48230 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TM4SF4P48230 DMKN-229ENST00000467637 827 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
TM4SF4P48230 OR5BD1P-201ENST00000532527 817 ntBASIC16.88■□□□□ 0.29
TM4SF4P48230 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC16.88■□□□□ 0.29
TM4SF4P48230 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TM4SF4P48230 AC020934.2-201ENST00000592400 456 ntTSL 3 BASIC16.88■□□□□ 0.29
TM4SF4P48230 RPS5-204ENST00000598098 536 ntTSL 2 BASIC16.88■□□□□ 0.29
TM4SF4P48230 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
TM4SF4P48230 AL627230.2-201ENST00000613254 655 ntBASIC16.88■□□□□ 0.29
TM4SF4P48230 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TM4SF4P48230 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC16.88■□□□□ 0.29
TM4SF4P48230 REXO1L2P-201ENST00000425429 2069 ntBASIC16.88■□□□□ 0.29
TM4SF4P48230 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TM4SF4P48230 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
TM4SF4P48230 API5-208ENST00000531273 1868 ntTSL 2 BASIC16.88■□□□□ 0.29
TM4SF4P48230 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TM4SF4P48230 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.88■□□□□ 0.29
TM4SF4P48230 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TM4SF4P48230 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TM4SF4P48230 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.88■□□□□ 0.29
TM4SF4P48230 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TM4SF4P48230 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TM4SF4P48230 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TM4SF4P48230 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TM4SF4P48230 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TM4SF4P48230 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TM4SF4P48230 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
TM4SF4P48230 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TM4SF4P48230 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC16.87■□□□□ 0.29
TM4SF4P48230 AC025183.3-201ENST00000623526 1482 ntBASIC16.87■□□□□ 0.29
TM4SF4P48230 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TM4SF4P48230 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TM4SF4P48230 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TM4SF4P48230 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
TM4SF4P48230 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TM4SF4P48230 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
TM4SF4P48230 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TM4SF4P48230 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TM4SF4P48230 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TM4SF4P48230 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TM4SF4P48230 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.87■□□□□ 0.29
TM4SF4P48230 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC16.87■□□□□ 0.29
TM4SF4P48230 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TM4SF4P48230 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
TM4SF4P48230 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC16.87■□□□□ 0.29
TM4SF4P48230 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
TM4SF4P48230 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC16.87■□□□□ 0.29
TM4SF4P48230 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC16.87■□□□□ 0.29
TM4SF4P48230 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TM4SF4P48230 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC16.87■□□□□ 0.29
TM4SF4P48230 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC16.87■□□□□ 0.29
TM4SF4P48230 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC16.87■□□□□ 0.29
TM4SF4P48230 AL353150.1-201ENST00000456944 583 ntTSL 2 BASIC16.87■□□□□ 0.29
TM4SF4P48230 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC16.87■□□□□ 0.29
TM4SF4P48230 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TM4SF4P48230 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TM4SF4P48230 FTLP5-201ENST00000586853 534 ntBASIC16.87■□□□□ 0.29
TM4SF4P48230 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TM4SF4P48230 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC16.87■□□□□ 0.29
TM4SF4P48230 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TM4SF4P48230 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC16.87■□□□□ 0.29
TM4SF4P48230 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC16.87■□□□□ 0.29
TM4SF4P48230 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms