Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
SLC6A12P48065 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC6A12P48065 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC6A12P48065 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
SLC6A12P48065 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
SLC6A12P48065 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC6A12P48065 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC6A12P48065 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
SLC6A12P48065 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC6A12P48065 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SLC6A12P48065 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
SLC6A12P48065 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.63□□□□□ -0.07
SLC6A12P48065 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.63□□□□□ -0.07
SLC6A12P48065 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.63□□□□□ -0.07
SLC6A12P48065 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
SLC6A12P48065 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.63□□□□□ -0.07
SLC6A12P48065 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SLC6A12P48065 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC6A12P48065 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.63□□□□□ -0.07
SLC6A12P48065 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
SLC6A12P48065 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC6A12P48065 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SLC6A12P48065 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
SLC6A12P48065 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.63□□□□□ -0.07
SLC6A12P48065 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
SLC6A12P48065 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SLC6A12P48065 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.63□□□□□ -0.07
SLC6A12P48065 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.63□□□□□ -0.07
SLC6A12P48065 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.63□□□□□ -0.07
SLC6A12P48065 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.63□□□□□ -0.07
SLC6A12P48065 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SLC6A12P48065 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.63□□□□□ -0.07
SLC6A12P48065 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.63□□□□□ -0.07
SLC6A12P48065 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SLC6A12P48065 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC6A12P48065 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.63□□□□□ -0.07
SLC6A12P48065 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.63□□□□□ -0.07
SLC6A12P48065 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.63□□□□□ -0.07
SLC6A12P48065 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC6A12P48065 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC6A12P48065 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
SLC6A12P48065 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.63□□□□□ -0.07
SLC6A12P48065 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.63□□□□□ -0.07
SLC6A12P48065 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
SLC6A12P48065 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
SLC6A12P48065 KRT8P35-201ENST00000483942 1338 ntBASIC14.63□□□□□ -0.07
SLC6A12P48065 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
SLC6A12P48065 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
SLC6A12P48065 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SLC6A12P48065 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC6A12P48065 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.62□□□□□ -0.07
SLC6A12P48065 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SLC6A12P48065 LRRC59-203ENST00000576448 1531 ntBASIC14.62□□□□□ -0.07
SLC6A12P48065 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
SLC6A12P48065 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SLC6A12P48065 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
SLC6A12P48065 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC6A12P48065 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.62□□□□□ -0.07
SLC6A12P48065 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.62□□□□□ -0.07
SLC6A12P48065 AC007686.3-201ENST00000619017 3487 ntBASIC14.62□□□□□ -0.07
SLC6A12P48065 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
SLC6A12P48065 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC6A12P48065 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC6A12P48065 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
SLC6A12P48065 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC6A12P48065 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SLC6A12P48065 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC6A12P48065 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC6A12P48065 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
SLC6A12P48065 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC6A12P48065 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC14.62□□□□□ -0.07
SLC6A12P48065 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SLC6A12P48065 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.62□□□□□ -0.07
SLC6A12P48065 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SLC6A12P48065 KRT18P25-201ENST00000508931 1278 ntBASIC14.62□□□□□ -0.07
SLC6A12P48065 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
SLC6A12P48065 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.62□□□□□ -0.07
SLC6A12P48065 AC009486.1-201ENST00000569860 813 ntBASIC14.62□□□□□ -0.07
SLC6A12P48065 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.62□□□□□ -0.07
SLC6A12P48065 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.62□□□□□ -0.07
SLC6A12P48065 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SLC6A12P48065 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.62□□□□□ -0.07
SLC6A12P48065 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
SLC6A12P48065 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC6A12P48065 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
SLC6A12P48065 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SLC6A12P48065 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SLC6A12P48065 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
SLC6A12P48065 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.62□□□□□ -0.07
SLC6A12P48065 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SLC6A12P48065 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC6A12P48065 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
SLC6A12P48065 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.61□□□□□ -0.07
SLC6A12P48065 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
SLC6A12P48065 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
SLC6A12P48065 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC6A12P48065 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC6A12P48065 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
SLC6A12P48065 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
SLC6A12P48065 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms