Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC16.39■□□□□ 0.21
TNFSF9P41273 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
TNFSF9P41273 TPO-206ENST00000382269 1155 ntTSL 5 BASIC16.39■□□□□ 0.21
TNFSF9P41273 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.39■□□□□ 0.21
TNFSF9P41273 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.39■□□□□ 0.21
TNFSF9P41273 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.39■□□□□ 0.21
TNFSF9P41273 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC16.39■□□□□ 0.21
TNFSF9P41273 PFN2-215ENST00000497148 743 ntTSL 4 BASIC16.39■□□□□ 0.21
TNFSF9P41273 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC16.39■□□□□ 0.21
TNFSF9P41273 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
TNFSF9P41273 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC16.39■□□□□ 0.21
TNFSF9P41273 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.39■□□□□ 0.21
TNFSF9P41273 HNRNPA1P48-202ENST00000565308 961 ntBASIC16.39■□□□□ 0.21
TNFSF9P41273 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.39■□□□□ 0.21
TNFSF9P41273 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNFSF9P41273 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNFSF9P41273 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNFSF9P41273 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNFSF9P41273 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNFSF9P41273 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.39■□□□□ 0.21
TNFSF9P41273 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.39■□□□□ 0.21
TNFSF9P41273 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNFSF9P41273 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TNFSF9P41273 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TNFSF9P41273 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TNFSF9P41273 INE2-201ENST00000630399 1874 ntBASIC16.39■□□□□ 0.21
TNFSF9P41273 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
TNFSF9P41273 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
TNFSF9P41273 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.39■□□□□ 0.21
TNFSF9P41273 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
TNFSF9P41273 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC16.38■□□□□ 0.21
TNFSF9P41273 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFSF9P41273 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TNFSF9P41273 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFSF9P41273 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFSF9P41273 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.38■□□□□ 0.21
TNFSF9P41273 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.38■□□□□ 0.21
TNFSF9P41273 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFSF9P41273 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFSF9P41273 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.38■□□□□ 0.21
TNFSF9P41273 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TNFSF9P41273 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFSF9P41273 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
TNFSF9P41273 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC16.38■□□□□ 0.21
TNFSF9P41273 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC16.38■□□□□ 0.21
TNFSF9P41273 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC16.38■□□□□ 0.21
TNFSF9P41273 AL391280.1-201ENST00000506969 1062 ntBASIC16.38■□□□□ 0.21
TNFSF9P41273 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC16.38■□□□□ 0.21
TNFSF9P41273 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
TNFSF9P41273 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TNFSF9P41273 MIR6752-201ENST00000618442 71 ntBASIC16.38■□□□□ 0.21
TNFSF9P41273 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.38■□□□□ 0.21
TNFSF9P41273 AC008687.7-202ENST00000637404 953 ntBASIC16.38■□□□□ 0.21
TNFSF9P41273 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
TNFSF9P41273 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TNFSF9P41273 AL354989.2-201ENST00000435838 1540 ntBASIC16.38■□□□□ 0.21
TNFSF9P41273 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.38■□□□□ 0.21
TNFSF9P41273 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFSF9P41273 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFSF9P41273 AHCYP2-201ENST00000430630 1300 ntBASIC16.38■□□□□ 0.21
TNFSF9P41273 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
TNFSF9P41273 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFSF9P41273 AJ011931.1-201ENST00000618749 2492 ntBASIC16.38■□□□□ 0.21
TNFSF9P41273 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC16.38■□□□□ 0.21
TNFSF9P41273 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFSF9P41273 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
TNFSF9P41273 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
TNFSF9P41273 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNFSF9P41273 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNFSF9P41273 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TNFSF9P41273 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC16.37■□□□□ 0.21
TNFSF9P41273 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TNFSF9P41273 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNFSF9P41273 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNFSF9P41273 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TNFSF9P41273 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TNFSF9P41273 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.37■□□□□ 0.21
TNFSF9P41273 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.37■□□□□ 0.21
TNFSF9P41273 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.37■□□□□ 0.21
TNFSF9P41273 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TNFSF9P41273 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.37■□□□□ 0.21
TNFSF9P41273 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNFSF9P41273 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNFSF9P41273 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNFSF9P41273 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TNFSF9P41273 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC16.37■□□□□ 0.21
TNFSF9P41273 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
TNFSF9P41273 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
TNFSF9P41273 OLR1-203ENST00000432556 950 ntTSL 2 BASIC16.37■□□□□ 0.21
TNFSF9P41273 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC16.37■□□□□ 0.21
TNFSF9P41273 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.37■□□□□ 0.21
TNFSF9P41273 AC106820.3-201ENST00000561653 397 ntBASIC16.37■□□□□ 0.21
TNFSF9P41273 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.37■□□□□ 0.21
TNFSF9P41273 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
TNFSF9P41273 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC16.37■□□□□ 0.21
TNFSF9P41273 OR10B1P-201ENST00000601666 907 ntBASIC16.37■□□□□ 0.21
TNFSF9P41273 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC16.37■□□□□ 0.21
TNFSF9P41273 AC138466.3-201ENST00000619983 221 ntBASIC16.37■□□□□ 0.21
TNFSF9P41273 AL033527.4-201ENST00000641026 673 ntBASIC16.37■□□□□ 0.21
TNFSF9P41273 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms