Protein–RNA interactions for Protein: P41219

PRPH, Peripherin, humanhuman

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPHP41219 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRPHP41219 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRPHP41219 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRPHP41219 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRPHP41219 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRPHP41219 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRPHP41219 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.17■□□□□ 0.34
PRPHP41219 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRPHP41219 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.17■□□□□ 0.34
PRPHP41219 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRPHP41219 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRPHP41219 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
PRPHP41219 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC17.16■□□□□ 0.34
PRPHP41219 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRPHP41219 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRPHP41219 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRPHP41219 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRPHP41219 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.16■□□□□ 0.34
PRPHP41219 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.16■□□□□ 0.34
PRPHP41219 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRPHP41219 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRPHP41219 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRPHP41219 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRPHP41219 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRPHP41219 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRPHP41219 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRPHP41219 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRPHP41219 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRPHP41219 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRPHP41219 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.16■□□□□ 0.34
PRPHP41219 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
PRPHP41219 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRPHP41219 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.16■□□□□ 0.34
PRPHP41219 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.16■□□□□ 0.34
PRPHP41219 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.16■□□□□ 0.34
PRPHP41219 AC093433.1-201ENST00000458048 571 ntBASIC17.16■□□□□ 0.34
PRPHP41219 GIMAP3P-201ENST00000495150 836 ntBASIC17.16■□□□□ 0.34
PRPHP41219 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRPHP41219 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.16■□□□□ 0.34
PRPHP41219 RPSAP52-203ENST00000622976 1023 ntBASIC17.16■□□□□ 0.34
PRPHP41219 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRPHP41219 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRPHP41219 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRPHP41219 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC17.16■□□□□ 0.34
PRPHP41219 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRPHP41219 PCDHA3-202ENST00000532566 4594 ntBASIC17.16■□□□□ 0.34
PRPHP41219 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC17.16■□□□□ 0.34
PRPHP41219 AC018442.1-201ENST00000421439 2061 ntBASIC17.16■□□□□ 0.34
PRPHP41219 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRPHP41219 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC17.16■□□□□ 0.34
PRPHP41219 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PRPHP41219 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PRPHP41219 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRPHP41219 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC17.15■□□□□ 0.34
PRPHP41219 AC023090.2-201ENST00000625182 2110 ntBASIC17.15■□□□□ 0.34
PRPHP41219 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
PRPHP41219 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PRPHP41219 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRPHP41219 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRPHP41219 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRPHP41219 AC098614.1-201ENST00000368528 745 ntBASIC17.15■□□□□ 0.34
PRPHP41219 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRPHP41219 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
PRPHP41219 ACTG1P3-201ENST00000431775 1114 ntBASIC17.15■□□□□ 0.34
PRPHP41219 EIF3FP3-201ENST00000434851 1086 ntBASIC17.15■□□□□ 0.34
PRPHP41219 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC17.15■□□□□ 0.34
PRPHP41219 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
PRPHP41219 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.15■□□□□ 0.34
PRPHP41219 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRPHP41219 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PRPHP41219 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.15■□□□□ 0.34
PRPHP41219 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC17.15■□□□□ 0.34
PRPHP41219 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17.15■□□□□ 0.34
PRPHP41219 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.15■□□□□ 0.34
PRPHP41219 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC17.15■□□□□ 0.34
PRPHP41219 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRPHP41219 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PRPHP41219 CICP14-201ENST00000629111 2732 ntBASIC17.15■□□□□ 0.34
PRPHP41219 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC17.15■□□□□ 0.34
PRPHP41219 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PRPHP41219 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PRPHP41219 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC17.15■□□□□ 0.34
PRPHP41219 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC17.15■□□□□ 0.34
PRPHP41219 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC17.15■□□□□ 0.34
PRPHP41219 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.15■□□□□ 0.34
PRPHP41219 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
PRPHP41219 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
PRPHP41219 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
PRPHP41219 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC17.14■□□□□ 0.34
PRPHP41219 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
PRPHP41219 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRPHP41219 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRPHP41219 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PRPHP41219 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.14■□□□□ 0.33
PRPHP41219 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRPHP41219 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC17.14■□□□□ 0.33
PRPHP41219 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRPHP41219 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PRPHP41219 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC17.14■□□□□ 0.33
PRPHP41219 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms