Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
USP6P35125 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC20.11■□□□□ 0.81
USP6P35125 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
USP6P35125 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC20.11■□□□□ 0.81
USP6P35125 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
USP6P35125 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
USP6P35125 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
USP6P35125 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
USP6P35125 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC20.11■□□□□ 0.81
USP6P35125 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
USP6P35125 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
USP6P35125 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
USP6P35125 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
USP6P35125 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
USP6P35125 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
USP6P35125 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC20.1■□□□□ 0.81
USP6P35125 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC20.1■□□□□ 0.81
USP6P35125 RPL8P2-201ENST00000430538 502 ntBASIC20.1■□□□□ 0.81
USP6P35125 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC20.1■□□□□ 0.81
USP6P35125 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
USP6P35125 PFN2-206ENST00000461930 606 ntTSL 4 BASIC20.1■□□□□ 0.81
USP6P35125 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC20.1■□□□□ 0.81
USP6P35125 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
USP6P35125 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC20.1■□□□□ 0.81
USP6P35125 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC20.1■□□□□ 0.81
USP6P35125 MIR3188-201ENST00000583494 85 ntBASIC20.1■□□□□ 0.81
USP6P35125 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
USP6P35125 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC20.1■□□□□ 0.81
USP6P35125 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC20.1■□□□□ 0.81
USP6P35125 MVK-217ENST00000639206 367 ntTSL 5 BASIC20.1■□□□□ 0.81
USP6P35125 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
USP6P35125 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC20.1■□□□□ 0.81
USP6P35125 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
USP6P35125 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC20.1■□□□□ 0.81
USP6P35125 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
USP6P35125 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
USP6P35125 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
USP6P35125 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC20.1■□□□□ 0.81
USP6P35125 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
USP6P35125 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
USP6P35125 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
USP6P35125 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
USP6P35125 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
USP6P35125 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
USP6P35125 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
USP6P35125 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
USP6P35125 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
USP6P35125 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
USP6P35125 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
USP6P35125 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
USP6P35125 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
USP6P35125 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
USP6P35125 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
USP6P35125 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
USP6P35125 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
USP6P35125 AC078991.1-201ENST00000437297 610 ntBASIC20.1■□□□□ 0.81
USP6P35125 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
USP6P35125 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC20.1■□□□□ 0.81
USP6P35125 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC20.1■□□□□ 0.81
USP6P35125 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC20.1■□□□□ 0.81
USP6P35125 AC242376.2-201ENST00000619355 883 ntBASIC20.1■□□□□ 0.81
USP6P35125 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC20.1■□□□□ 0.81
USP6P35125 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC20.1■□□□□ 0.81
USP6P35125 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
USP6P35125 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
USP6P35125 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
USP6P35125 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
USP6P35125 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
USP6P35125 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC20.09■□□□□ 0.81
USP6P35125 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
USP6P35125 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
USP6P35125 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
USP6P35125 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
USP6P35125 AC015909.3-201ENST00000572855 1794 ntBASIC20.09■□□□□ 0.81
USP6P35125 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC20.09■□□□□ 0.81
USP6P35125 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC20.09■□□□□ 0.81
USP6P35125 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
USP6P35125 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
USP6P35125 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
USP6P35125 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
USP6P35125 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
USP6P35125 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
USP6P35125 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
USP6P35125 RNA5SP359-201ENST00000364838 113 ntBASIC20.09■□□□□ 0.81
USP6P35125 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
USP6P35125 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
USP6P35125 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC20.09■□□□□ 0.81
USP6P35125 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC20.09■□□□□ 0.81
USP6P35125 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC20.09■□□□□ 0.81
USP6P35125 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC20.09■□□□□ 0.81
USP6P35125 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC20.09■□□□□ 0.81
USP6P35125 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC20.09■□□□□ 0.81
USP6P35125 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC20.09■□□□□ 0.81
USP6P35125 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC20.09■□□□□ 0.81
USP6P35125 FOS-204ENST00000554617 796 ntTSL 2 BASIC20.09■□□□□ 0.81
USP6P35125 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC20.09■□□□□ 0.81
USP6P35125 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC20.09■□□□□ 0.81
USP6P35125 AC092171.5-201ENST00000608012 942 ntBASIC20.09■□□□□ 0.81
USP6P35125 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
USP6P35125 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms