Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 KLK11-210ENST00000600362 759 ntTSL 3 BASIC17.28■□□□□ 0.36
CNGA1P29973 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNGA1P29973 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNGA1P29973 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.28■□□□□ 0.36
CNGA1P29973 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNGA1P29973 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.28■□□□□ 0.36
CNGA1P29973 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNGA1P29973 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.28■□□□□ 0.36
CNGA1P29973 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CNGA1P29973 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CNGA1P29973 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNGA1P29973 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.27■□□□□ 0.36
CNGA1P29973 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNGA1P29973 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CNGA1P29973 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC17.27■□□□□ 0.36
CNGA1P29973 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CNGA1P29973 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNGA1P29973 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.27■□□□□ 0.36
CNGA1P29973 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.27■□□□□ 0.36
CNGA1P29973 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC17.27■□□□□ 0.36
CNGA1P29973 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
CNGA1P29973 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CNGA1P29973 SDCCAG3P2-201ENST00000326105 1023 ntBASIC17.27■□□□□ 0.36
CNGA1P29973 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNGA1P29973 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.27■□□□□ 0.36
CNGA1P29973 AC021723.1-201ENST00000486306 515 ntBASIC17.27■□□□□ 0.36
CNGA1P29973 AC004066.1-201ENST00000502488 802 ntBASIC17.27■□□□□ 0.36
CNGA1P29973 AC005740.2-201ENST00000511085 419 ntBASIC17.27■□□□□ 0.36
CNGA1P29973 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC17.27■□□□□ 0.36
CNGA1P29973 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC17.27■□□□□ 0.36
CNGA1P29973 AC005730.2-201ENST00000564549 1184 ntBASIC17.27■□□□□ 0.36
CNGA1P29973 RN7SL713P-201ENST00000582127 302 ntBASIC17.27■□□□□ 0.36
CNGA1P29973 MIR5572-201ENST00000583188 137 ntBASIC17.27■□□□□ 0.36
CNGA1P29973 SPCS2P2-201ENST00000603270 608 ntBASIC17.27■□□□□ 0.36
CNGA1P29973 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC17.27■□□□□ 0.36
CNGA1P29973 AL353726.2-201ENST00000623259 884 ntBASIC17.27■□□□□ 0.36
CNGA1P29973 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CNGA1P29973 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CNGA1P29973 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.27■□□□□ 0.36
CNGA1P29973 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CNGA1P29973 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNGA1P29973 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CNGA1P29973 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CNGA1P29973 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.27■□□□□ 0.35
CNGA1P29973 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CNGA1P29973 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.27■□□□□ 0.35
CNGA1P29973 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
CNGA1P29973 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CNGA1P29973 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CNGA1P29973 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CNGA1P29973 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CNGA1P29973 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.27■□□□□ 0.35
CNGA1P29973 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.35
CNGA1P29973 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CNGA1P29973 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CNGA1P29973 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC17.27■□□□□ 0.35
CNGA1P29973 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CNGA1P29973 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC17.26■□□□□ 0.35
CNGA1P29973 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CNGA1P29973 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.26■□□□□ 0.35
CNGA1P29973 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CNGA1P29973 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNGA1P29973 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CNGA1P29973 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
CNGA1P29973 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC17.26■□□□□ 0.35
CNGA1P29973 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNGA1P29973 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.26■□□□□ 0.35
CNGA1P29973 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.26■□□□□ 0.35
CNGA1P29973 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNGA1P29973 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
CNGA1P29973 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CNGA1P29973 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNGA1P29973 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNGA1P29973 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNGA1P29973 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC17.26■□□□□ 0.35
CNGA1P29973 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CNGA1P29973 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CNGA1P29973 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC17.26■□□□□ 0.35
CNGA1P29973 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC17.26■□□□□ 0.35
CNGA1P29973 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC17.26■□□□□ 0.35
CNGA1P29973 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC17.26■□□□□ 0.35
CNGA1P29973 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC17.26■□□□□ 0.35
CNGA1P29973 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
CNGA1P29973 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC17.26■□□□□ 0.35
CNGA1P29973 NAT9-224ENST00000583757 583 ntTSL 3 BASIC17.26■□□□□ 0.35
CNGA1P29973 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC17.26■□□□□ 0.35
CNGA1P29973 PRSS30P-206ENST00000641773 873 ntBASIC17.26■□□□□ 0.35
CNGA1P29973 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC17.26■□□□□ 0.35
CNGA1P29973 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNGA1P29973 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNGA1P29973 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CNGA1P29973 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNGA1P29973 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNGA1P29973 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNGA1P29973 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC17.26■□□□□ 0.35
CNGA1P29973 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CNGA1P29973 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.26■□□□□ 0.35
CNGA1P29973 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CNGA1P29973 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CNGA1P29973 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms