Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
CD40LGP29965 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.56□□□□□ -0.24
CD40LGP29965 AF238378.1-201ENST00000526806 358 ntBASIC13.56□□□□□ -0.24
CD40LGP29965 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC13.56□□□□□ -0.24
CD40LGP29965 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC13.56□□□□□ -0.24
CD40LGP29965 AL662844.1-201ENST00000546340 181 ntBASIC13.56□□□□□ -0.24
CD40LGP29965 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC13.56□□□□□ -0.24
CD40LGP29965 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC13.56□□□□□ -0.24
CD40LGP29965 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC13.56□□□□□ -0.24
CD40LGP29965 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC13.56□□□□□ -0.24
CD40LGP29965 MIR1199-201ENST00000621445 119 ntBASIC13.56□□□□□ -0.24
CD40LGP29965 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
CD40LGP29965 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD40LGP29965 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD40LGP29965 INE2-201ENST00000630399 1874 ntBASIC13.56□□□□□ -0.24
CD40LGP29965 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CD40LGP29965 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.56□□□□□ -0.24
CD40LGP29965 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD40LGP29965 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC13.56□□□□□ -0.24
CD40LGP29965 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.56□□□□□ -0.24
CD40LGP29965 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC13.56□□□□□ -0.24
CD40LGP29965 AC129492.6-201ENST00000611383 1305 ntBASIC13.56□□□□□ -0.24
CD40LGP29965 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.56□□□□□ -0.24
CD40LGP29965 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CD40LGP29965 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC13.56□□□□□ -0.24
CD40LGP29965 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC13.56□□□□□ -0.24
CD40LGP29965 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD40LGP29965 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD40LGP29965 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CD40LGP29965 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD40LGP29965 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD40LGP29965 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.56□□□□□ -0.24
CD40LGP29965 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CD40LGP29965 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.56□□□□□ -0.24
CD40LGP29965 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.56□□□□□ -0.24
CD40LGP29965 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CD40LGP29965 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CD40LGP29965 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CD40LGP29965 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD40LGP29965 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
CD40LGP29965 AC131902.2-201ENST00000566892 2172 ntBASIC13.55□□□□□ -0.24
CD40LGP29965 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.55□□□□□ -0.24
CD40LGP29965 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
CD40LGP29965 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC13.55□□□□□ -0.24
CD40LGP29965 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD40LGP29965 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
CD40LGP29965 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD40LGP29965 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.55□□□□□ -0.24
CD40LGP29965 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD40LGP29965 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD40LGP29965 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD40LGP29965 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC13.55□□□□□ -0.24
CD40LGP29965 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.55□□□□□ -0.24
CD40LGP29965 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD40LGP29965 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD40LGP29965 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD40LGP29965 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.55□□□□□ -0.24
CD40LGP29965 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD40LGP29965 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CD40LGP29965 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD40LGP29965 PI4KAP1-204ENST00000612579 1703 ntBASIC13.55□□□□□ -0.24
CD40LGP29965 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
CD40LGP29965 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
CD40LGP29965 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD40LGP29965 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
CD40LGP29965 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD40LGP29965 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CD40LGP29965 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD40LGP29965 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC13.55□□□□□ -0.24
CD40LGP29965 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CD40LGP29965 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD40LGP29965 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CD40LGP29965 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD40LGP29965 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
CD40LGP29965 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC13.54□□□□□ -0.24
CD40LGP29965 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC13.54□□□□□ -0.24
CD40LGP29965 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
CD40LGP29965 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.54□□□□□ -0.24
CD40LGP29965 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CD40LGP29965 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD40LGP29965 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.54□□□□□ -0.24
CD40LGP29965 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD40LGP29965 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD40LGP29965 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CD40LGP29965 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD40LGP29965 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.54□□□□□ -0.24
CD40LGP29965 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC13.54□□□□□ -0.24
CD40LGP29965 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CD40LGP29965 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC13.54□□□□□ -0.24
CD40LGP29965 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC13.54□□□□□ -0.24
CD40LGP29965 LAGE3P1-201ENST00000425356 484 ntBASIC13.54□□□□□ -0.24
CD40LGP29965 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC13.54□□□□□ -0.24
CD40LGP29965 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC13.54□□□□□ -0.24
CD40LGP29965 UNC93B7-201ENST00000509439 705 ntBASIC13.54□□□□□ -0.24
CD40LGP29965 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CD40LGP29965 OR7E14P-202ENST00000530490 1290 ntBASIC13.54□□□□□ -0.24
CD40LGP29965 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC13.54□□□□□ -0.24
CD40LGP29965 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CD40LGP29965 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC13.54□□□□□ -0.24
CD40LGP29965 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms