Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 AC023310.1-201ENST00000554836 735 ntBASIC12.86□□□□□ -0.35
COL8A2P25067 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
COL8A2P25067 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC12.86□□□□□ -0.35
COL8A2P25067 MIR4538-201ENST00000581377 78 ntBASIC12.86□□□□□ -0.35
COL8A2P25067 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC12.86□□□□□ -0.35
COL8A2P25067 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
COL8A2P25067 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
COL8A2P25067 AC010328.2-201ENST00000597698 1111 ntBASIC12.86□□□□□ -0.35
COL8A2P25067 TECR-220ENST00000600083 1204 ntTSL 2 BASIC12.86□□□□□ -0.35
COL8A2P25067 AC138951.2-201ENST00000623455 1161 ntBASIC12.86□□□□□ -0.35
COL8A2P25067 AC008687.7-202ENST00000637404 953 ntBASIC12.86□□□□□ -0.35
COL8A2P25067 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
COL8A2P25067 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
COL8A2P25067 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC12.86□□□□□ -0.35
COL8A2P25067 BID-213ENST00000615414 2236 ntTSL 5 BASIC12.86□□□□□ -0.35
COL8A2P25067 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
COL8A2P25067 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
COL8A2P25067 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC12.86□□□□□ -0.35
COL8A2P25067 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC12.86□□□□□ -0.35
COL8A2P25067 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
COL8A2P25067 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC12.86□□□□□ -0.35
COL8A2P25067 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
COL8A2P25067 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
COL8A2P25067 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.86□□□□□ -0.35
COL8A2P25067 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC12.86□□□□□ -0.35
COL8A2P25067 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
COL8A2P25067 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
COL8A2P25067 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
COL8A2P25067 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
COL8A2P25067 REXO1L5P-201ENST00000622260 2098 ntBASIC12.85□□□□□ -0.35
COL8A2P25067 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC12.85□□□□□ -0.35
COL8A2P25067 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
COL8A2P25067 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
COL8A2P25067 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
COL8A2P25067 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
COL8A2P25067 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC12.85□□□□□ -0.35
COL8A2P25067 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC12.85□□□□□ -0.35
COL8A2P25067 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
COL8A2P25067 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
COL8A2P25067 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
COL8A2P25067 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
COL8A2P25067 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC12.85□□□□□ -0.35
COL8A2P25067 AC087481.3-201ENST00000602886 1894 ntBASIC12.85□□□□□ -0.35
COL8A2P25067 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC12.85□□□□□ -0.35
COL8A2P25067 AC020658.6-201ENST00000623564 1870 ntBASIC12.85□□□□□ -0.35
COL8A2P25067 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
COL8A2P25067 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
COL8A2P25067 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
COL8A2P25067 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
COL8A2P25067 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
COL8A2P25067 TPM3P8-201ENST00000330554 643 ntBASIC12.85□□□□□ -0.35
COL8A2P25067 TPO-206ENST00000382269 1155 ntTSL 5 BASIC12.85□□□□□ -0.35
COL8A2P25067 BRWD1P1-201ENST00000401091 371 ntBASIC12.85□□□□□ -0.35
COL8A2P25067 MPV17-205ENST00000402310 906 ntTSL 5 BASIC12.85□□□□□ -0.35
COL8A2P25067 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.85□□□□□ -0.35
COL8A2P25067 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.85□□□□□ -0.35
COL8A2P25067 MIR1908-201ENST00000410394 80 ntBASIC12.85□□□□□ -0.35
COL8A2P25067 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC12.85□□□□□ -0.35
COL8A2P25067 YBX1P6-201ENST00000442962 1002 ntBASIC12.85□□□□□ -0.35
COL8A2P25067 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC12.85□□□□□ -0.35
COL8A2P25067 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
COL8A2P25067 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
COL8A2P25067 RN7SL219P-201ENST00000582872 296 ntBASIC12.85□□□□□ -0.35
COL8A2P25067 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC12.85□□□□□ -0.35
COL8A2P25067 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
COL8A2P25067 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
COL8A2P25067 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
COL8A2P25067 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
COL8A2P25067 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
COL8A2P25067 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
COL8A2P25067 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
COL8A2P25067 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
COL8A2P25067 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC12.85□□□□□ -0.35
COL8A2P25067 AHCYP2-201ENST00000430630 1300 ntBASIC12.85□□□□□ -0.35
COL8A2P25067 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.85□□□□□ -0.35
COL8A2P25067 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC12.85□□□□□ -0.35
COL8A2P25067 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC12.85□□□□□ -0.35
COL8A2P25067 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC12.84□□□□□ -0.35
COL8A2P25067 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
COL8A2P25067 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
COL8A2P25067 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
COL8A2P25067 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
COL8A2P25067 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
COL8A2P25067 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
COL8A2P25067 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
COL8A2P25067 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
COL8A2P25067 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
COL8A2P25067 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC12.84□□□□□ -0.35
COL8A2P25067 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC12.84□□□□□ -0.35
COL8A2P25067 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
COL8A2P25067 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
COL8A2P25067 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
COL8A2P25067 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
COL8A2P25067 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC12.84□□□□□ -0.35
COL8A2P25067 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
COL8A2P25067 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
COL8A2P25067 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
COL8A2P25067 NME2-201ENST00000393183 568 ntTSL 2 BASIC12.84□□□□□ -0.35
COL8A2P25067 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC12.84□□□□□ -0.35
COL8A2P25067 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms