Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
VAMP1P23763 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
VAMP1P23763 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC12.95□□□□□ -0.34
VAMP1P23763 REXO1L1P-201ENST00000379010 6598 ntBASIC12.95□□□□□ -0.34
VAMP1P23763 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
VAMP1P23763 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC12.95□□□□□ -0.34
VAMP1P23763 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
VAMP1P23763 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
VAMP1P23763 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
VAMP1P23763 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC12.95□□□□□ -0.34
VAMP1P23763 DDT-204ENST00000404092 805 ntTSL 3 BASIC12.95□□□□□ -0.34
VAMP1P23763 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.95□□□□□ -0.34
VAMP1P23763 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC12.95□□□□□ -0.34
VAMP1P23763 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
VAMP1P23763 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC12.95□□□□□ -0.34
VAMP1P23763 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC12.95□□□□□ -0.34
VAMP1P23763 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC12.95□□□□□ -0.34
VAMP1P23763 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC12.95□□□□□ -0.34
VAMP1P23763 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC12.95□□□□□ -0.34
VAMP1P23763 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC12.95□□□□□ -0.34
VAMP1P23763 RPL28-209ENST00000560055 670 ntTSL 3 BASIC12.95□□□□□ -0.34
VAMP1P23763 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VAMP1P23763 CLEC4GP1-201ENST00000596555 870 ntBASIC12.95□□□□□ -0.34
VAMP1P23763 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC12.95□□□□□ -0.34
VAMP1P23763 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VAMP1P23763 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VAMP1P23763 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC12.95□□□□□ -0.34
VAMP1P23763 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VAMP1P23763 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
VAMP1P23763 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.95□□□□□ -0.34
VAMP1P23763 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VAMP1P23763 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
VAMP1P23763 KRT8P37-201ENST00000451609 1420 ntBASIC12.95□□□□□ -0.34
VAMP1P23763 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
VAMP1P23763 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
VAMP1P23763 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC12.95□□□□□ -0.34
VAMP1P23763 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
VAMP1P23763 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC12.95□□□□□ -0.34
VAMP1P23763 AMT-224ENST00000635808 1610 ntTSL 5 BASIC12.95□□□□□ -0.34
VAMP1P23763 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC12.95□□□□□ -0.34
VAMP1P23763 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC12.95□□□□□ -0.34
VAMP1P23763 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
VAMP1P23763 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
VAMP1P23763 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VAMP1P23763 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VAMP1P23763 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
VAMP1P23763 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.94□□□□□ -0.34
VAMP1P23763 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VAMP1P23763 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC12.94□□□□□ -0.34
VAMP1P23763 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VAMP1P23763 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VAMP1P23763 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC12.94□□□□□ -0.34
VAMP1P23763 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
VAMP1P23763 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
VAMP1P23763 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
VAMP1P23763 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VAMP1P23763 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC12.94□□□□□ -0.34
VAMP1P23763 MEX3B-202ENST00000558133 4333 ntBASIC12.94□□□□□ -0.34
VAMP1P23763 AL139385.1-201ENST00000611744 3272 ntBASIC12.94□□□□□ -0.34
VAMP1P23763 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VAMP1P23763 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
VAMP1P23763 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VAMP1P23763 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VAMP1P23763 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
VAMP1P23763 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.94□□□□□ -0.34
VAMP1P23763 NARF-206ENST00000457415 1668 ntTSL 5 BASIC12.94□□□□□ -0.34
VAMP1P23763 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC12.94□□□□□ -0.34
VAMP1P23763 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VAMP1P23763 AP002414.3-201ENST00000589352 1468 ntBASIC12.94□□□□□ -0.34
VAMP1P23763 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC12.94□□□□□ -0.34
VAMP1P23763 AC098859.1-201ENST00000502915 1238 ntBASIC12.94□□□□□ -0.34
VAMP1P23763 KATNBL1P4-201ENST00000503545 918 ntBASIC12.94□□□□□ -0.34
VAMP1P23763 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
VAMP1P23763 AC061975.2-201ENST00000581722 295 ntBASIC12.94□□□□□ -0.34
VAMP1P23763 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC12.94□□□□□ -0.34
VAMP1P23763 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
VAMP1P23763 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC12.94□□□□□ -0.34
VAMP1P23763 AC005562.1-201ENST00000583030 3219 ntBASIC12.94□□□□□ -0.34
VAMP1P23763 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC12.94□□□□□ -0.34
VAMP1P23763 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VAMP1P23763 AC089987.1-201ENST00000551654 2209 ntBASIC12.94□□□□□ -0.34
VAMP1P23763 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC12.94□□□□□ -0.34
VAMP1P23763 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
VAMP1P23763 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
VAMP1P23763 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.94□□□□□ -0.34
VAMP1P23763 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC12.94□□□□□ -0.34
VAMP1P23763 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VAMP1P23763 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
VAMP1P23763 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
VAMP1P23763 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
VAMP1P23763 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VAMP1P23763 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.94□□□□□ -0.34
VAMP1P23763 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
VAMP1P23763 AC084364.1-201ENST00000551967 1556 ntBASIC12.94□□□□□ -0.34
VAMP1P23763 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VAMP1P23763 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC12.94□□□□□ -0.34
VAMP1P23763 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
VAMP1P23763 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
VAMP1P23763 MST1P2-201ENST00000457982 2291 ntBASIC12.93□□□□□ -0.34
VAMP1P23763 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms