Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
TNFSF4P23510 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TNFSF4P23510 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TNFSF4P23510 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TNFSF4P23510 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TNFSF4P23510 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TNFSF4P23510 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TNFSF4P23510 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TNFSF4P23510 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TNFSF4P23510 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.06□□□□□ -0.32
TNFSF4P23510 AC136621.1-201ENST00000624017 2304 ntBASIC13.06□□□□□ -0.32
TNFSF4P23510 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TNFSF4P23510 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TNFSF4P23510 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TNFSF4P23510 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC13.06□□□□□ -0.32
TNFSF4P23510 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TNFSF4P23510 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TNFSF4P23510 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
TNFSF4P23510 PEG13-201ENST00000631594 5667 ntBASIC13.06□□□□□ -0.32
TNFSF4P23510 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
TNFSF4P23510 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.06□□□□□ -0.32
TNFSF4P23510 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.06□□□□□ -0.32
TNFSF4P23510 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TNFSF4P23510 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.06□□□□□ -0.32
TNFSF4P23510 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.06□□□□□ -0.32
TNFSF4P23510 GHSR-202ENST00000427970 912 ntBASIC13.06□□□□□ -0.32
TNFSF4P23510 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.06□□□□□ -0.32
TNFSF4P23510 AL355864.2-201ENST00000447420 863 ntBASIC13.06□□□□□ -0.32
TNFSF4P23510 RN7SL837P-201ENST00000463010 287 ntBASIC13.06□□□□□ -0.32
TNFSF4P23510 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.06□□□□□ -0.32
TNFSF4P23510 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
TNFSF4P23510 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
TNFSF4P23510 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
TNFSF4P23510 AC010319.3-201ENST00000597028 470 ntBASIC13.06□□□□□ -0.32
TNFSF4P23510 AP005019.2-201ENST00000615104 511 ntBASIC13.06□□□□□ -0.32
TNFSF4P23510 AL035252.4-201ENST00000624174 288 ntBASIC13.06□□□□□ -0.32
TNFSF4P23510 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TNFSF4P23510 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TNFSF4P23510 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.06□□□□□ -0.32
TNFSF4P23510 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
TNFSF4P23510 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.06□□□□□ -0.32
TNFSF4P23510 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
TNFSF4P23510 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
TNFSF4P23510 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TNFSF4P23510 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC13.06□□□□□ -0.32
TNFSF4P23510 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TNFSF4P23510 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC13.06□□□□□ -0.32
TNFSF4P23510 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC13.06□□□□□ -0.32
TNFSF4P23510 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
TNFSF4P23510 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
TNFSF4P23510 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
TNFSF4P23510 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TNFSF4P23510 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TNFSF4P23510 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.06□□□□□ -0.32
TNFSF4P23510 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.06□□□□□ -0.32
TNFSF4P23510 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TNFSF4P23510 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.06□□□□□ -0.32
TNFSF4P23510 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TNFSF4P23510 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC13.06□□□□□ -0.32
TNFSF4P23510 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TNFSF4P23510 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
TNFSF4P23510 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
TNFSF4P23510 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TNFSF4P23510 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
TNFSF4P23510 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TNFSF4P23510 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TNFSF4P23510 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TNFSF4P23510 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TNFSF4P23510 AC012508.2-201ENST00000567613 1472 ntBASIC13.05□□□□□ -0.32
TNFSF4P23510 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TNFSF4P23510 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TNFSF4P23510 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TNFSF4P23510 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TNFSF4P23510 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TNFSF4P23510 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
TNFSF4P23510 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TNFSF4P23510 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
TNFSF4P23510 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TNFSF4P23510 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TNFSF4P23510 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.05□□□□□ -0.32
TNFSF4P23510 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TNFSF4P23510 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TNFSF4P23510 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TNFSF4P23510 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.05□□□□□ -0.32
TNFSF4P23510 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
TNFSF4P23510 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.05□□□□□ -0.32
TNFSF4P23510 ACTG1P3-201ENST00000431775 1114 ntBASIC13.05□□□□□ -0.32
TNFSF4P23510 KRT43P-201ENST00000434019 910 ntBASIC13.05□□□□□ -0.32
TNFSF4P23510 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.05□□□□□ -0.32
TNFSF4P23510 AC114812.1-204ENST00000449669 728 ntBASIC13.05□□□□□ -0.32
TNFSF4P23510 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
TNFSF4P23510 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TNFSF4P23510 GIMAP3P-201ENST00000495150 836 ntBASIC13.05□□□□□ -0.32
TNFSF4P23510 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.05□□□□□ -0.32
TNFSF4P23510 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC13.05□□□□□ -0.32
TNFSF4P23510 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.05□□□□□ -0.32
TNFSF4P23510 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
TNFSF4P23510 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TNFSF4P23510 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.05□□□□□ -0.32
TNFSF4P23510 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms