Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC092384.3-202ENST00000564646 2873 ntBASIC17.62■□□□□ 0.41
ERCC3P19447 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC3P19447 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC3P19447 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC17.62■□□□□ 0.41
ERCC3P19447 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC17.62■□□□□ 0.41
ERCC3P19447 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.62■□□□□ 0.41
ERCC3P19447 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC3P19447 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
ERCC3P19447 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC3P19447 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC3P19447 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC3P19447 TKT-202ENST00000423516 2075 ntTSL 2 BASIC17.62■□□□□ 0.41
ERCC3P19447 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC3P19447 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.62■□□□□ 0.41
ERCC3P19447 LRRC59-203ENST00000576448 1531 ntBASIC17.62■□□□□ 0.41
ERCC3P19447 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
ERCC3P19447 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC3P19447 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC17.61■□□□□ 0.41
ERCC3P19447 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC3P19447 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC3P19447 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
ERCC3P19447 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC17.61■□□□□ 0.41
ERCC3P19447 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC17.61■□□□□ 0.41
ERCC3P19447 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC3P19447 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC17.61■□□□□ 0.41
ERCC3P19447 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC3P19447 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC3P19447 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC3P19447 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
ERCC3P19447 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC3P19447 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC3P19447 RPS15-201ENST00000233609 534 ntTSL 2 BASIC17.61■□□□□ 0.41
ERCC3P19447 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC3P19447 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC3P19447 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC3P19447 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC3P19447 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC3P19447 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.61■□□□□ 0.41
ERCC3P19447 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC17.61■□□□□ 0.41
ERCC3P19447 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC17.61■□□□□ 0.41
ERCC3P19447 AC004898.1-201ENST00000451057 766 ntBASIC17.61■□□□□ 0.41
ERCC3P19447 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC3P19447 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.61■□□□□ 0.41
ERCC3P19447 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC17.61■□□□□ 0.41
ERCC3P19447 RPS15-205ENST00000586686 562 ntTSL 5 BASIC17.61■□□□□ 0.41
ERCC3P19447 RPS15-208ENST00000591804 711 ntTSL 5 BASIC17.61■□□□□ 0.41
ERCC3P19447 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC3P19447 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC17.61■□□□□ 0.41
ERCC3P19447 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC17.61■□□□□ 0.41
ERCC3P19447 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
ERCC3P19447 AC244452.3-201ENST00000636814 210 ntBASIC17.61■□□□□ 0.41
ERCC3P19447 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC3P19447 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC3P19447 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC3P19447 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
ERCC3P19447 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
ERCC3P19447 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC3P19447 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC17.61■□□□□ 0.41
ERCC3P19447 AC136621.1-201ENST00000624017 2304 ntBASIC17.61■□□□□ 0.41
ERCC3P19447 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC3P19447 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
ERCC3P19447 AC007787.1-201ENST00000588095 1583 ntBASIC17.61■□□□□ 0.41
ERCC3P19447 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC3P19447 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
ERCC3P19447 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ERCC3P19447 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.61■□□□□ 0.41
ERCC3P19447 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
ERCC3P19447 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC3P19447 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.6■□□□□ 0.41
ERCC3P19447 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC3P19447 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC3P19447 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC3P19447 AC013268.4-201ENST00000637413 2228 ntBASIC17.6■□□□□ 0.41
ERCC3P19447 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC3P19447 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC3P19447 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC17.6■□□□□ 0.41
ERCC3P19447 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC17.6■□□□□ 0.41
ERCC3P19447 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC3P19447 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC3P19447 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC3P19447 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC3P19447 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC3P19447 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC3P19447 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC3P19447 AL139094.1-201ENST00000405549 1188 ntBASIC17.6■□□□□ 0.41
ERCC3P19447 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC17.6■□□□□ 0.41
ERCC3P19447 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.6■□□□□ 0.41
ERCC3P19447 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC17.6■□□□□ 0.41
ERCC3P19447 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC3P19447 AKR7A2P1-201ENST00000460134 915 ntBASIC17.6■□□□□ 0.41
ERCC3P19447 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC17.6■□□□□ 0.41
ERCC3P19447 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC17.6■□□□□ 0.41
ERCC3P19447 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
ERCC3P19447 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
ERCC3P19447 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
ERCC3P19447 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.6■□□□□ 0.41
ERCC3P19447 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ERCC3P19447 KC6-205ENST00000599934 556 ntTSL 4 BASIC17.6■□□□□ 0.41
ERCC3P19447 ENPP7P14-201ENST00000621765 1040 ntBASIC17.6■□□□□ 0.41
ERCC3P19447 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms