Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ATF3P18847 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATF3P18847 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC20.48■□□□□ 0.87
ATF3P18847 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
ATF3P18847 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ATF3P18847 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATF3P18847 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
ATF3P18847 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
ATF3P18847 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATF3P18847 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC20.47■□□□□ 0.87
ATF3P18847 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATF3P18847 REXO1L4P-201ENST00000605109 1937 ntBASIC20.47■□□□□ 0.87
ATF3P18847 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATF3P18847 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
ATF3P18847 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
ATF3P18847 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATF3P18847 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATF3P18847 KRT18P36-201ENST00000411618 1276 ntBASIC20.47■□□□□ 0.87
ATF3P18847 KRT17P4-201ENST00000429445 819 ntBASIC20.47■□□□□ 0.87
ATF3P18847 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
ATF3P18847 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC20.47■□□□□ 0.87
ATF3P18847 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC20.47■□□□□ 0.87
ATF3P18847 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC20.47■□□□□ 0.87
ATF3P18847 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATF3P18847 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
ATF3P18847 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC20.47■□□□□ 0.87
ATF3P18847 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ATF3P18847 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
ATF3P18847 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATF3P18847 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATF3P18847 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
ATF3P18847 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
ATF3P18847 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ATF3P18847 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC20.46■□□□□ 0.87
ATF3P18847 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
ATF3P18847 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATF3P18847 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATF3P18847 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATF3P18847 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
ATF3P18847 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC20.46■□□□□ 0.87
ATF3P18847 AQP7P5-201ENST00000428759 1049 ntBASIC20.46■□□□□ 0.87
ATF3P18847 AQP7P4-201ENST00000447083 1042 ntBASIC20.46■□□□□ 0.87
ATF3P18847 AQP7P2-201ENST00000453967 1041 ntBASIC20.46■□□□□ 0.87
ATF3P18847 DUX4L50-201ENST00000455245 715 ntBASIC20.46■□□□□ 0.87
ATF3P18847 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ATF3P18847 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC20.46■□□□□ 0.87
ATF3P18847 AC093909.3-201ENST00000504783 336 ntBASIC20.46■□□□□ 0.87
ATF3P18847 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC20.46■□□□□ 0.87
ATF3P18847 AC138701.2-201ENST00000553634 226 ntBASIC20.46■□□□□ 0.87
ATF3P18847 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC20.46■□□□□ 0.87
ATF3P18847 AQP7P3-201ENST00000624547 1041 ntBASIC20.46■□□□□ 0.87
ATF3P18847 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.46■□□□□ 0.87
ATF3P18847 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ATF3P18847 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATF3P18847 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
ATF3P18847 AC079328.2-201ENST00000561241 3354 ntBASIC20.46■□□□□ 0.87
ATF3P18847 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
ATF3P18847 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATF3P18847 FAM90A21P-201ENST00000510875 1396 ntBASIC20.46■□□□□ 0.87
ATF3P18847 FAM90A15P-201ENST00000514465 1395 ntBASIC20.46■□□□□ 0.87
ATF3P18847 FAM90A6P-201ENST00000515148 1394 ntBASIC20.46■□□□□ 0.87
ATF3P18847 FAM90A16P-201ENST00000526662 1395 ntBASIC20.46■□□□□ 0.87
ATF3P18847 FAM90A9P-201ENST00000527940 1395 ntBASIC20.46■□□□□ 0.87
ATF3P18847 FAM90A5P-201ENST00000528738 1395 ntBASIC20.46■□□□□ 0.87
ATF3P18847 FAM90A14P-201ENST00000530386 1395 ntBASIC20.46■□□□□ 0.87
ATF3P18847 FAM90A13P-201ENST00000534703 1395 ntBASIC20.46■□□□□ 0.87
ATF3P18847 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
ATF3P18847 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.87
ATF3P18847 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATF3P18847 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATF3P18847 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATF3P18847 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC20.45■□□□□ 0.86
ATF3P18847 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC20.45■□□□□ 0.86
ATF3P18847 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC20.45■□□□□ 0.86
ATF3P18847 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATF3P18847 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
ATF3P18847 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ATF3P18847 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC20.45■□□□□ 0.86
ATF3P18847 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
ATF3P18847 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
ATF3P18847 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
ATF3P18847 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC20.45■□□□□ 0.86
ATF3P18847 RHEB-207ENST00000496004 744 ntTSL 2 BASIC20.45■□□□□ 0.86
ATF3P18847 RNA5SP417-201ENST00000516459 108 ntBASIC20.45■□□□□ 0.86
ATF3P18847 FAM86B3P-203ENST00000523992 854 ntBASIC20.45■□□□□ 0.86
ATF3P18847 NEU3-207ENST00000534628 746 ntTSL 2 BASIC20.45■□□□□ 0.86
ATF3P18847 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC20.45■□□□□ 0.86
ATF3P18847 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATF3P18847 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC20.45■□□□□ 0.86
ATF3P18847 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC20.45■□□□□ 0.86
ATF3P18847 AC011471.3-201ENST00000623576 402 ntBASIC20.45■□□□□ 0.86
ATF3P18847 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC20.45■□□□□ 0.86
ATF3P18847 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC20.45■□□□□ 0.86
ATF3P18847 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATF3P18847 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.45■□□□□ 0.86
ATF3P18847 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATF3P18847 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATF3P18847 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATF3P18847 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
ATF3P18847 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms